feat: online verification, node removals, and knowledge browser
CI / quality (push) Canceled after 0s
CI / quality (push) Canceled after 0s
Adds claim-bound online evidence records and citation verification scripts, node removal transport/adapter, retrieval benchmark and owner-review tooling, GraphCanvas/SourceDetail knowledge browser UI, and the ingest handoff helper. Bumps the agents/gewu pack to the online-verification branch.
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# Knowledge browser implementation acceptance
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Date: 16 October 2026
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Status: implementation delivered; local automated verification passed; product-level and visual acceptance remain partial.
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## Delivered
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- Added authenticated `POST /v1/knowledge/browse` with empty-query browsing, project/shared scope, deterministic filters and ordering, project and filtered counts, project-wide facet vocabulary/counts, bounded pages and revision-bound cursors.
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- Added authenticated `POST /v1/knowledge/graph` with authorized center-node one-hop neighborhoods; both browse routes are HTTP-only in the operation catalog. The source list returns its authorized total. Regenerated OpenAPI, catalog and TypeScript contracts and refreshed the agent pack manifest.
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- Replaced the stale/problems/topics side links with project Knowledge, Sources and Graph tabs. The knowledge list has title/date/relevance sorting, immediate type/freshness/shared filters, searchable multi-select tag/audience/use/domain facets, count labels, a cursor-backed Previous/Next pager, URL-restorable page number, and restart behavior for expired cursors. Sources has an accurate count/range and Previous/Next controls.
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- Kept the evidence reader and added navigable incoming/outgoing relationship targets, source-target opening and neighbor pagination. The graph has scope selection, search/type filters, grouping, zoom/reset, prominent accepted edges, faint links for nodes citing the same source revision, a compact node preview with reader navigation, and a synchronized accessible node list.
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## Verification
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- `./.venv/bin/python -m pytest -q`: **209 passed**.
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- `npm --prefix web run build`: passed (TypeScript and production Vite build).
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- `npm --prefix web test -- src/shell/App.test.tsx`: **16 passed**.
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- `npm --prefix web run check`: TypeScript and ESLint passed; **6 unrelated existing failures** remain in Accounts, Admin and ProjectsSection tests.
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- `./.venv/bin/python agents/gewu/scripts/manifest_tool.py verify`: passed.
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- Restarted the local API on port 8000 and Vite on port 5173; `/health` returned `{"status":"ok","service":"gewu"}` and the app HTML loaded. T3 navigation reached the restarted UI at 1280×800, but snapshot automation failed, so no screenshot or signed-in project interaction is claimed.
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## Remaining acceptance work
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- Filters disclose searchable native checkbox groups with removable selected chips and counts; a dedicated keyboard/screen-reader usability and type-ahead review remains open.
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- Knowledge page number reload and browser navigation rebuild the opaque cursor stack. Source page navigation has counts and Previous/Next but its current page does not yet restore after reload.
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- Graph selection and Fit to selection load a scoped one-hop neighborhood; viewport/layout restoration after opening a node is not implemented. Graph controls and node list have not been checked at narrow widths.
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- Automated tests cover URL page-two restoration, source page navigation, a scoped neighborhood and denied center-node access. Synthetic tests do not establish pagination against a >40-node corpus with duplicate titles, nor graph behavior under a large capped fixture. Denied-edge browser flows, full focus restoration, and narrow-width/assistive-technology review remain open.
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- Source totals are counted through the index separately from source rows, so cross-index atomic freshness is not guaranteed.
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- The full web check still has six failures in Accounts, Admin and ProjectsSection tests unrelated to this feature. TypeScript and ESLint pass before those test failures.
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# Knowledge quality implementation and demo report
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Date: 16 October 2026
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Status: the demo records, search-budget fix, and automated checks pass; autonomous ingestion and the broader qualification plan remain open.
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## Problem addressed
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The live-store review recorded in [the plan](../KNOWLEDGE_QUALITY_PLAN.md) found empty classification facets, one citation per node, short explanations, no typed knowledge links, and source excerpts without contextual navigation. The change tested the service and agent workflow against those failure modes without editing the production corpus.
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## Delivered in this slice
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- Added the additive `update_node` proposal operation. It preserves stable identity, lifecycle, prior claims and evidence, and requires the proposer to assess new evidence. Facets may be added without silently replacing existing material. The installed GEWU_agent contribution protocol documents the behavior.
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- Corrected project-only source registration and policy scoping, so a project-scoped agent can register sources for that project while shared writes remain separately authorized.
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- Fixed strict JSON parsing in prepared edge evidence.
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- Added contract/schema/type exports and refreshed and verified the installed agent pack.
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- Created a private demo project, synthetic four-file corpus (two PDFs, HTML, Markdown), and separate viewer/agent credentials. The project and credentials are intentionally retained for the user's UI review. No credential values are included here.
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- Accepted five richly described, classified knowledge nodes, one evidence-backed typed relationship, and seven source revisions across PDFs, HTML and Markdown. The existing authoring-cost node was enriched in place with eleven page-7 evidence spans from a second PDF; stable identity and prior claims were preserved.
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- Verified source locations from node citations. Text sources open the stored passage; PDF citations expose page 1 and the exact extracted quote. This is page-and-excerpt navigation, not a native PDF visual highlight.
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The fixtures are explicitly synthetic and do not establish real-world research findings. The agent read the exact four source blocks using the required Antigravity model pin `gemini-3.8-flash-low`. A combined agent proposal turn timed out; after validating those passages and offsets, proposals were completed with the authenticated typed MCP workflow. This validates the contract and resulting records, but does not count as a successful end-to-end autonomous agent ingestion run.
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## Demo record and benchmark
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Persistent project: `narrative-knowledge-demo`. The original durable run `kb-quality-demo-20261016-01` remains completed at revision 7. Follow-up runs added a Riedl narrative-analysis node, enriched the existing authoring-cost node from the empirical study, and added a WhatIF authoring-tool node. The current project has five nodes, one edge, and seven source revisions. The new Riedl node has three supported claims with fifteen exact PDF page citations. The authoring-cost update preserved the stable node ID and added one distinct claim supported by eleven page-7 excerpts; the source reports twelve participants and measures authoring time, clicks and perceived difficulty while comparing SG and IBT, with its study limits retained. The WhatIF node has two claims with eight HTML text-span citations and records the source's small study samples and limits. All five nodes have tags, audience, use and domain facets.
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A six-question hand-authored smoke set returned its intended target first for all six questions at an 8,000-codepoint budget after the compact-search fix. Results used 4,048–6,489 codepoints; warmed median search latency was 6.3 ms, with a 1.33 s first query while the local index initialized. These questions are not blind or independently judged and do not establish general retrieval quality. The previous full-evidence response for the empirical-study query used 28,143 codepoints and could not fit at 8,000; the compact response uses 6,489 codepoints. Compact rows retain claim text and per-claim evidence counts, and omit citation quotes. Full citations remain available by setting `include_evidence=true` or opening the canonical node. The API retains full-evidence behavior by default for compatibility.
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The authenticated graph endpoint returned all three nodes and the accepted edge. The UI initially showed an empty graph because the graph request was never started when the tab opened; adding the load effect then exposed a race with unrelated reader requests sharing one generation counter. Graph loading now has its own request generation and starts on initial/direct graph routes as well as tab selection. A regression test covers tab activation, and the shared UI preview now shows **3 nodes · 1 link**.
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## Verification
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Completed checks after the search-contract change: `./scripts/python-tool pytest -q` passed (239 tests); `npm --prefix web run check` passed TypeScript, ESLint and all 30 web tests; `./scripts/python-tool mypy src` passed; generated OpenAPI, MCP contract, agent manifest and TypeScript exports verified. The backend health endpoint previously returned 200.
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Earlier on this date, the full web check had six failing UI tests. The current check passes all 30 tests; those failures are resolved in the current workspace.
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## Remaining qualification work
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## Extended source-batch attempt (16 October 2026)
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To test beyond the original synthetic four-file corpus, seven additional inputs were prepared under `.data/gewu/demo-workspace/Inbox/More/`: four published research documents (three PDFs and one HTML page), the pinned Ink Markdown guide, a field-overview PDF, and a synthetic WebVTT locator fixture. Local extraction using the production `LocalSourceExtractor` succeeded for all seven; the VTT parser returned four timestamped cues. The source index records origin, scope, intended review questions, and SHA-256 digests. The VTT file is explicitly a locator test fixture and is not research evidence.
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The user authorized creation of a new demo-scoped ingest credential and use of GEWU_agent. Antigravity was pinned to `gemini-3.8-flash-low`. Diagnostics, project context, and `run_status` succeeded. The durable run `run-demo-20261016-narrative-01` is active at revision 0. Initial MCP calls exposed two argument/scope errors: `run_create` rejected `scope.project_ids` and required `scope.projects`; `list_sources` was called with `include_shared: true`, outside the project authorization. Although a corrected continuation was started, the CLI spent its time repeatedly reading out-of-workspace files and did not reach source capture before it was interrupted. It did not capture or register any of the seven sources, submit proposals, or produce acceptance receipts. Therefore, this batch adds no accepted knowledge and is not counted as an end-to-end agent ingestion success.
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The retained database remains at the verified baseline of three accepted nodes, one typed edge, and four source revisions. No existing records were deleted or replaced. The seven source files remain available in the demo workspace. Since no batch was accepted, the prior five-question retrieval smoke score and existing source-navigation results remain the only measured benchmarks; no new benchmark score is claimed.
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## Scope-instruction repair and retry (16 October 2026)
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The previous blanket instruction to include shared scope for every source was incorrect. Backend validation uses the source's explicit `ingested_for` domains: a source registered for this project alone affects only the project's policy and can be accepted with `scope.include_shared=false`. The demo credential therefore remains project-only; adding `shared` to its grant list would also grant this agent shared write authority. The GEWU pack is updated to v0.20.16: ingestion instructions now require explicit project-only scope by default, document the correct `run_create` request field (`scope.projects`), and distinguish response-size budgets from provider context. The installed pack manifest and local install integrity hashes were refreshed and verified.
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Focused backend verification passed: `test_project_only_source_registration_does_not_write_shared_knowledge`. A fresh Antigravity run, pinned to `gemini-3.8-flash-low`, passed diagnostics, project context, run creation, and project-only source listing. It still did not upload the selected Riedl PDF. The agent then attempted to read old repository reports/tests outside the research workspace and requested permission to run a shell command that would inspect Antigravity MCP configuration; that command was denied. No credential/configuration contents were exposed by the denied command. The initial run `run-demo-20261016-narrative-01` remains active at revision 0; the fresh run `kb-more-riedl-20261016-01` was created for the one-source retry. Neither has accepted source or proposal receipts. The agent still needs a host-level connector discovery/call correction before the ingestion and benchmark request is complete.
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- Complete structured explanation sections (including evidence-bound math, figures, and safe rendering); the current records contain richer claim/evidence content but not the planned structured content format.
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- Native PDF source archival, multicolumn/page-coordinate mapping, and geometric highlights; current demo supports page plus exact extracted quote fallback only.
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- Run actual autonomous ingestion and curation through the installed GEWU_agent with the pinned model, without proposal harness completion; diagnose the combined-turn timeout and demonstrate resume/retry behavior.
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- Build a frozen, independently scored withheld benchmark and compare repeated/reordered runs, multiple principals, authorization failures, reliability, cost, and larger corpus latency. Current five-question run is smoke evidence only.
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- Run the installed GEWU_agent autonomously through capture, evidence-grounded proposal, evaluation and accepted receipt. The manual typed-MCP acceptance path works, but the bounded autonomous retry below timed out without an agent report.
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- Build a frozen, independently judged retrieval benchmark; the six-question run is only a smoke benchmark. The separate four-file qualification, protected owner decisions and reserved/repetition phases remain open and must retain their original gates.
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- Complete native PDF page rendering/highlights and the remaining browser, boundary, security, migration, VPS and production-corpus qualification gates.
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- The four-file release qualification, VPS deployment, and existing production corpus migration have not been performed.
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## Compact search response and bounded retry (16 October 2026)
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The response-size limit is measured as canonical-JSON Unicode codepoints, despite the `budget_tokens` field name. Search used to repeat every citation inside the node's claims and again in the envelope-level citations array. The API now has an explicit `include_evidence` option. Its default remains `true` for existing callers. With `false`, claims retain their text and `evidence_count`, the result row marks `evidence_included: false`, and citation quote payloads are omitted. The GEWU `kb-query` skill now requests compact search, then calls `get_node` before citing or inspecting the strongest result. The benchmark runner follows the same contract. Full source excerpts, exact PDF page labels and claim-to-evidence relationships remain available in the canonical node read.
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For the authoring-study query, compact search returned one node in 6,489 codepoints at an 8,000 budget. Full-evidence mode used 28,143 codepoints at 50,000 and returned no node at 8,000. This closes the response-fit defect for the tested query while preserving full-evidence API behavior by default. It does not change the budget unit into model tokens.
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The GEWU pack was bumped to v0.20.19, the query instructions and MCP/OpenAPI contracts were refreshed, and the updated pack was installed in the retained demo workspace with the previous copy backed up. The Antigravity CLI lists the required `gemini-3.8-flash-low` model. A one-source autonomous retry was started with that explicit pin, project-only scope and strict workspace boundaries; it produced no response within the 120-second print window and its local process was stopped. The canonical database head remained `a236bfe205f63b19e10305582d1eb86d9c72586a`, so the retry added no source or proposal. The successful source additions and existing-node enrichment documented above were submitted and accepted through authenticated typed MCP, not through a successful autonomous GEWU_agent turn.
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"date": "2026-10-16",
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"baselineCommit": "a3156f4e08fac5b34739f82b0c72b28dbcf11349",
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"workingTree": "Pre-existing staged and unstaged changes; measured working tree rather than clean HEAD",
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"method": "T3 collaborative preview; synthetic browser-memory API fixtures; responsive measurements from isolated same-browser iframe copies of rendered root and loaded stylesheet rules. These are static layout checks, not independent interactive device sessions.",
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"fixture": {
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"tags": 100,
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"longProjectName": true,
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"longTitles": true
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"knowledge": [
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"page": 2560,
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"width": 2560,
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"workspace": {
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"y": 0
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"page": 3440,
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"width": 3440,
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"workspace": {
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"h": 1440,
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"w": 1580,
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"x": 224,
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"y": 0
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}
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}
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"liveGraph": {
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"container": {
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"bottom": 1265.1052856445312,
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"height": 608.131591796875,
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"left": 14,
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"right": 361.5789489746094,
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"top": 656.9736938476562,
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"x": 14,
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"controls": [
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{
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"rect": {
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"x": 229.89474487304688,
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"y": 585.2894897460938
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"text": "Zoom in"
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},
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{
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"rect": {
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"x": 14,
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"y": 609.1842041015625
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},
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"text": "Zoom out"
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},
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{
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||||
"rect": {
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"bottom": 633.0789413452148,
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"height": 23.894737243652344,
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"x": 96.96052551269531,
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"y": 609.1842041015625
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},
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"text": "Reset view"
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||||
},
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||||
{
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||||
"rect": {
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||||
"bottom": 633.0789413452148,
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"height": 23.894737243652344,
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"right": 301.11842346191406,
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"width": 110.53947448730469,
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||||
"x": 190.57894897460938,
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||||
"y": 609.1842041015625
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||||
},
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||||
"text": "Project graph"
|
||||
},
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||||
{
|
||||
"rect": {
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||||
"bottom": 656.9737167358398,
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"height": 23.894737243652344,
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"left": 14,
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"right": 132.52631378173828,
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"top": 633.0789794921875,
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"width": 118.52631378173828,
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"x": 14,
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||||
"y": 633.0789794921875
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||||
},
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||||
"text": "Fit to selection"
|
||||
}
|
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],
|
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"labels": [
|
||||
{
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||||
"rect": {
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||||
"bottom": 704.4976968765259,
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"height": 4.210526466369629,
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"left": 60.649452209472656,
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"right": 124.483642578125,
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"top": 700.2871704101562,
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"width": 63.834190368652344,
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"x": 60.649452209472656,
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"y": 700.2871704101562
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},
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||||
"text": "Scene count alone does not establish production costScene count alone does not establish"
|
||||
},
|
||||
{
|
||||
"rect": {
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"bottom": 708.7237100601196,
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"top": 704.51318359375,
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"width": 65.1086654663086,
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"x": 36.93933868408203,
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"y": 704.51318359375
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},
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"text": "Shared scene graphs separate asset reuse from path countsShared scene graphs separate asset r"
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},
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{
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"rect": {
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"bottom": 676.5869913101196,
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"top": 672.37646484375,
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"width": 64.24408721923828,
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"x": 61.42296600341797,
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"y": 672.37646484375
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},
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"text": "Foldback: reuse scenes only across equivalent story statesFoldback: reuse scenes only across e"
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}
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],
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"line": {
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"stroke": "none",
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"strokeWidth": "1px"
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},
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"node": {
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"fill": "rgb(0, 0, 0)"
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},
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"page": 376,
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"svg": {
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"bottom": 879.4210662841797,
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"height": 222.44737243652344,
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"left": 14,
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"right": 361.5657958984375,
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"top": 656.9736938476562,
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"width": 347.5657958984375,
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"x": 14,
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"y": 656.9736938476562
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},
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"text": "Skip to research\nG\nGEWU\nRESEARCH LIBRARY\n⌕\nKnowledge\n▤\nSources\n◎\nGraph\nAgent credentials\nAdministration\nDisconnect\n\nRESEARCH / SEARCH\n\nFind the evidence behind an idea.\n\nPROJECT LIBRARY\n\naudit-project-with-a-long-name\n\n3 knowledge nodes · 1 sources\n\nPROJECT\naudit-project-with-a-long-name\nKnowledge\nSources\nGraph\n\nACCEPTED RELATIONSHIPS\n\nKnowledge graph\n3 nodes · 1 links\n\nOnly accepted relationships are drawn. Select a node from the accessible list to open its record.\n\nFind nodeType\nAll types\ncase\ntechnique\n Group by typeZoom inZoom outReset viewProject graphFit to selection\nsupports\nScene count alone does not establish\nShared scene graphs separate asset r\nFoldback: reuse scenes only across e\ncaseSelectScene count alone does not establish production cost\ncaseSelectShared scene graphs separate asset reuse from path counts\ntechniqueSelectFoldback: reuse scenes only across equivalent story states\n\nLoaded 1 source record in the selected scope.\n\nRead-only research workspace\nKnowledge changes happen through authorized agent workflows.",
|
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"viewBox": "0 0 1000 640",
|
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"width": 391
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},
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||||
"limitations": [
|
||||
"Preview snapshot/click/type repeatedly failed; evaluate worked. No saved screenshots.",
|
||||
"Resize setting and measured outer viewport diverged; iframe viewports were measured directly.",
|
||||
"No real authenticated API latency, Safari, physical touch, screen reader, or 200% zoom verification."
|
||||
]
|
||||
}
|
||||
@@ -0,0 +1,76 @@
|
||||
# Four-file validation: failure analysis
|
||||
|
||||
Date: 16 October 2026
|
||||
Inputs: frozen `reference-v1.json`, `assertion-support-judgments.json`, `answer-scores.json`, original `answers-50k.json`, and the separately repaired `automated-bundle-v040/answers-50k-verified.json`.
|
||||
Scope: diagnostic only. No canonical data, owner decisions, raw answers, frozen rubric, or reserved questions were changed.
|
||||
|
||||
## Read this before acting
|
||||
|
||||
The saved support result is **53/57 fully supported (92.98%)**, with **four partial-support claim groups**. It does not list any fully unsupported group. The 57 groups comprise 50 main assertions and seven limitations, as recorded in the judgment artifact. These grades were made by one assistant evaluator, without human review or a second independent judge. The machine evidence-binding audit passed all structural quote/revision/locator checks; that audit does not establish that the cited passage entails the assertion.
|
||||
|
||||
The answer score for the 50k run is **29/48 content points before citation penalties (60.4%)**. The original artifact also had 15 invalid quote spans among 16 source citations, which reduced its recorded post-penalty score to 21/48. In bundle v040 those quote strings were restored from the cited accepted evidence in a separate verified copy; the raw answer remains unchanged. This is a structural repair only. The saved 29/48 content grade was not rerun against the verified copy, so it remains the last available content estimate, not a validated final score. A new grade should follow any candidate changes and should be independently checked.
|
||||
|
||||
## Claim-support failures
|
||||
|
||||
| Node / claim | Finding | Why the attached evidence falls short | Recommended candidate repair |
|
||||
|---|---|---|---|
|
||||
| `cmmm2015-research-control` / `cmmm-research-control-0` | Partial support | Claim combines control of the surrounding environment, multiple sensory modalities, separate manipulation of inputs, a vection study, and faster event processing. Its attached excerpt clearly supports the first two; the separately manipulated inputs, Keshavarz vection study, and faster processing passage occur later and are not included in this claim’s evidence span. | Split this into atomic claims. Keep the currently supported clauses with their quote; attach separate exact page spans to the manipulation/vection and processing claims. Do not infer these clauses from a neighboring claim’s evidence. |
|
||||
| `cmmm2015-research-control` / `cmmm-research-control-1` | Partial support | Claim combines Kozlov/Johansen helping behavior, Glotzbach avoidance, and Renaud gaze behavior. The attached later passage includes the latter descriptions but not the earlier study setup and full helping-behavior outcome. | Split by study; attach each study’s full result passage and preserve the node’s explicit limit that these are VR research applications, not dome-engagement evidence. |
|
||||
| `transcript1-attention` / `attention-0` | Partial support | The transcript supports the attributed positions, but the attached quote ends before the remainder of Lucas’s argument. The saved grader flags partial support; the exact missing clause should be checked against the extraction before editing. | Narrow the claim to what the current excerpt contains or extend its evidence span to include the complete exchange. Keep the attribution and avoid presenting the transcript’s sickness explanation as an experimentally validated universal threshold. |
|
||||
| `satie-performance-conditions` / `satie-performance-conditions-2` | Partial support / overstatement | Source says the authors were unable to perform the 128-speaker test with the current SuperCollider version. It does not say the version prevented the test. | Replace “the current version … prevented” with “the authors report they were unable to perform the 128-speaker test using the then-current version”; preserve the stated version comparison as a separate clause. |
|
||||
|
||||
The more specific pre-repair operator notes identify missing page-2 evidence for both CMMM claims and the unsupported causal implication in the SATIE wording. The attention claim’s saved judgment is partial support, but the operator note does not explain that particular claim. Resolve it from the full extraction before changing it; do not treat the guessed missing clause as established.
|
||||
|
||||
## Missing answer points
|
||||
|
||||
The table is the frozen primary evaluator’s breakdown for the 50k answer set. `0/2` means no expected content point was credited; `1/2` means partial coverage. It is not a human-verified grade. Many answers explicitly report `BUDGET_TRUNCATED`; those are evidence that bounded retrieval stopped before coverage was complete, not evidence that the source lacks the answer.
|
||||
|
||||
| Question | Score | Missing expected content / issue | Candidate improvement |
|
||||
|---|---:|---|---|
|
||||
| Q01 | 0/2 | Export’s attributed “immersive fallacy”: envelopment is not equivalent to engagement. | Retrieve the export’s critical-framework passage; answer as an attributed framework, not an independently proven law. |
|
||||
| Q02 | 1/2 | Funding gaps, distribution/licensing routes, and weak artist-to-venue pathways. Current answer covers deployment/time friction. | Add the export’s sector-barriers passage and distinguish funding/distribution barriers from production logistics. |
|
||||
| Q05 | 0/2 | Review’s distinction: immersion is technical capability; presence is psychological response. | Retrieve the review’s page-3 definition passage. |
|
||||
| Q06 | 0/2 | Higher visual fidelity/immersion does not necessarily create presence or realistic response. | Retrieve the review’s presence discussion and state the qualification directly. |
|
||||
| Q09 | 0/2 | Transcript’s attributed contrast: collective dome viewing versus isolated headset VR. | Retrieve the explicit comparison in the transcript; preserve speaker attribution. |
|
||||
| Q10 | 0/2 | Vortex Concerts people, Morrison Planetarium, and circa 1957. | Retrieve the specific historical segment; include names/place/date with a transcript citation. |
|
||||
| Q13 | 1/2 | Correctly distinguishes loudspeakers, clusters, and live sound objects, but the saved grade says the 8k response omitted physical counts/clusters. | Use the source-specific distinction (157 speakers, 31 output clusters; table counts rendered objects) and exact citations. Regrade both run variants consistently. |
|
||||
| Q17 | 1/2 | The answer gives venue-specific decoding, coordinates, and Ambisonics order, but does not state preservation/transfer costs identified by the rubric. | Retrieve the export’s transfer/preservation passage; avoid claiming a quantified cost unless the source provides it. |
|
||||
| Q18 | 0/2 | Export distinguishes planetaria, artistic fulldome, corporate immersion, and CAVE-adjacent installations. | Retrieve the taxonomy passage and answer each category explicitly. |
|
||||
| Q20 | 1/2 | Correctly rejects a universal sickness result but omits the review’s conflicting findings and conditions. | Retrieve the contrasting sickness findings and summarize their different conditions; do not invent a universal rate. |
|
||||
| Q21 | 1/2 | Content is graded complete, but original citation quote did not exactly match its source span. | Use v040’s repaired quote as a structural correction, then revalidate entailment and rescore. Treat the reported latency as a speaker claim. |
|
||||
| Q23 | 1/2 | Content is graded complete, but two original quote spans were invalid. | Keep the repaired exact quotes in the verified output; rerun structural and semantic checks. |
|
||||
| Q24 | 1/2 | Content is graded complete, but original citation quote was invalid. | Keep the repaired exact quote; rerun checks. |
|
||||
| Q25 | 0/2 | Cross-source synthesis needs both the immersion/presence qualification and the export’s immersive-fallacy framework. | Retrieve both passages; answer that neither source establishes a guarantee from sensory envelopment to engagement. |
|
||||
| Q26 | 1/2 | Avoids claiming universal dome preference but lacks the transcript’s communal/headset contrast and review’s individual variation in presence. | Retrieve both source passages and distinguish attributed rhetoric from user-level research findings. |
|
||||
| Q28 | 1/2 | Correctly says SATIE rendered-object counts cannot substitute for venue speaker inventory; expected point also includes venue-specific transfer costs. Original citations were invalid. | Keep quantities separate, add the transfer-cost evidence, and use repaired exact quotations from v040. |
|
||||
| Q29 | 1/2 | Gives SATIE and transcript examples, but original three citation spans were invalid. | Use repaired citations and retain the limitation: case studies demonstrate reported interaction, not comparative audience efficacy. |
|
||||
| Q31 | 1/2 | Gives export deployment constraints but misses the review’s apparatus size/cost/complexity discussion. | Retrieve CMMM resource-limit passage and compare it with export funding/distribution constraints without inferring project ROI. |
|
||||
| Q32 | 1/2 | Avoids unsupported override, but lacks both the transcript’s collective framing and review’s individual variation in presence. | Retrieve both passages and state that collective framing does not establish uniform individual response. |
|
||||
| Q34 | 1/2 | Correctly refuses a hardware guarantee; original citation quote was invalid. | Keep the conditional benchmark answer, use its exact repaired citation, and revalidate. |
|
||||
|
||||
This breakdown accounts for 19 lost points relative to a perfect 48-point score. It must not be interpreted as 19 independent answer-generation defects: Q21/Q23/Q24/Q28/Q29/Q34 include structural citation penalties in the old recorded score, while several zero/partial answers are explicit bounded-retrieval gaps.
|
||||
|
||||
## Improvement order
|
||||
|
||||
1. **Repair the four partial claims** in a disposable candidate dataset by splitting compound claims, adding claim-owned exact excerpts, and narrowing the SATIE causal wording. Re-run deterministic bindings and obtain a second independent semantic assessment. Keep changes out of canonical knowledge pending existing policy/owner review.
|
||||
2. **Fix retrieval coverage before answer prompting.** The missed Q01/Q05/Q06/Q09/Q10/Q18/Q25/Q26/Q31/Q32 content is mainly absent from the bounded answer context. Add question-to-source coverage checks and allow targeted continuation when a relevant search reports `BUDGET_TRUNCATED`; do not answer from a truncation marker as if search were exhaustive.
|
||||
3. **Use structured answer completeness checks.** Compare each draft against the frozen expected-point checklist before finalizing. Require a source citation for each factual point, preserve attribution and caveats, and keep cross-file answers tied to both required sources.
|
||||
4. **Retain output citation validation.** The quote restoration in bundle v040 fixed all 15 malformed source quote strings in the separate verified copy. Make exact quote validation a pre-score hard gate in the runner so invalid spans cannot depress or contaminate content-quality analysis.
|
||||
5. **Regrade with an auditable method.** Score the corrected answer artifact against the unchanged reference, save per-point decisions and cited evidence IDs, and use an independent second evaluator. Report agreement and adjudicate disagreements as unresolved rather than silently awarding points.
|
||||
6. **Only then rerun qualification gates.** Recalculate support and answer quality on the frozen benchmark, leaving reserved questions untouched until tuning thresholds pass.
|
||||
|
||||
## 16 October candidate trace and semantic recheck
|
||||
|
||||
The four original support groups have now been traced against their extraction text. The two CMMM2015 groups were compound claims whose passages were split across the PDF’s two-column extraction; the source supports the claims when separated and given claim-owned spans. The SATIE quote supports the careful wording that the authors could not perform the 128-speaker test with their then-current SuperCollider version; it does not establish why they could not. The transcript does contain the 2006 date and the later Black Holes identification, but the original quote began after the date.
|
||||
|
||||
An isolated candidate packet split the two CMMM claims into seven atomic claims and added the missing transcript context. The deterministic evidence-binding audit passed **8/8** candidate claims. Two independent Antigravity CLI judges (Gemini 3.8 Flash Medium and Gemini 4 Argon Medium) then marked **8/8 supported at confidence ≥0.90**. The earlier dual review independently marked the SATIE claim supported at 0.98 confidence from both judges. Together, these results resolve the four traced support defects at the candidate/advisory level. They do not change the frozen canonical score of 53/57, accept any correction proposal, or authorize an owner-protected decision. Candidate packet, binding audit, and judge traces are under `/tmp/gewu-dome-pilot/evaluation-v025/claim-repair-candidates-v052.json`, `claim-repair-structural-review-v052.json`, and `semantic-review-claim-repair-v052/`.
|
||||
|
||||
## Answer and live-agent retest status
|
||||
|
||||
Antigravity CLI 1.3.6 successfully ran the pinned two-judge semantic review in sandboxed plan mode. This confirms the model endpoint was available; an earlier quota message from a different provider attempt was stale. The same CLI did not complete the four-question GEWU answer batch within its print timeout, and a one-question retry ended with a provider API EOF. The GEWU MCP tool was not available in the clean CLI configuration. A Codex CLI Luna MCP attempt was also blocked by its `approval_policy=never` read-only setup, so it did not become a comparable answer run. A direct Luna fallback produced four explicit evidence gaps and one citation-verified Q13 answer; these smoke results are not a 24-question score.
|
||||
|
||||
The frozen 24-question answer rerun therefore remains incomplete. Its last comparable result is still 29/48 content points (60.4%) after separate exact-quote repair, below the 85% target; the original support audit remains 53/57 (92.98%), below 95%. The 16 reserved questions and three fresh repetitions remain correctly gated. The existing behavioral harness verifies upload-chunk resume, same-digest re-ingest, archive handling for injected instructions, and canonical-head preservation, but it did not test agent resistance or agent interruption/resume. Its changed-file derivative case, successful delayed indexing, and useful constrained-budget response are also not demonstrated end to end. These gaps must be closed with a working read-only/isolated GEWU MCP connection before qualification.
|
||||
|
||||
## Important score limitation
|
||||
|
||||
The two quality measures are not fully independent: the support judgment and answer score were produced by the same primary assistant evaluator, and neither received human review or a second blind evaluation. The support report is a useful failure locator, not a definitive certification. The v040 citation repair is verified structurally, but semantic answer scoring after repair has not yet been performed. These limitations must be addressed before claiming a pass.
|
||||
@@ -0,0 +1,180 @@
|
||||
# Four-file ingestion and digestion benchmark
|
||||
|
||||
Status: source review, tuning retrieval, owner-review packet, pinned clean-checkout retrieval baseline, and deterministic gate automation are complete. Qualification is not passed: accepted-claim support and answer-quality thresholds fail; semantic judging, host-level citation enforcement, remaining behavioral cases, owner decisions, reserved evaluation, and three comparable repetitions remain open. See the [results](four-file-validation-results.md). Previous pilot runs and their outcomes are excluded from benchmark scores.
|
||||
|
||||
## Automated completion plan
|
||||
|
||||
The goal is to finish the remaining evaluation without requiring a person to rewrite claims or hand-score routine cases. The automation may generate machine recommendations, candidate revisions, evidence audits, benchmark runs, and a review packet for later inspection. It must keep those recommendations distinct from human decisions and authoritative accepted knowledge. GEWU's existing owner challenge and acceptance policies remain in force: automation cannot impersonate an owner, approve a protected exception, or label a held proposal accepted. Such items remain quarantined while the rest of the evaluation proceeds.
|
||||
|
||||
| Phase | Automated work | Required output / gate |
|
||||
| --- | --- | --- |
|
||||
| A. Freeze the run | Create a clean disposable worktree and copied data root; pin backend, pack, parser, model weights, source/reference/question hashes, search mode, limits and environment. Validate clean state and service health before any calls. | Exclusive run manifest; fail closed on missing pins, dirty checkout, changed inputs, or an existing output path. Reference and reserved questions are not mounted into the ingestion agent context. |
|
||||
| B. Produce machine review decisions | For each held draft/correction, bind each atomic claim to its own source quote and locator; run deterministic citation, provenance, support-shape, contradiction, duplicate, and numeric/qualification checks. Use a separately pinned semantic judge only as an advisory second pass, with structured verdict, confidence, rationale, evidence IDs and model identity. Generate `accept-candidate`, `revise-candidate`, `exclude-candidate`, or `defer` recommendations and a proposed patch. | Immutable sidecar with input digest, exact proposal revision, check versions and per-claim findings. Low confidence, disagreement, unsupported meaning, policy hold, or required owner exception maps to `defer`; no machine recommendation is written as an owner decision or accepted record. **Deterministic binding audit implemented and run: all 42 claim bindings valid; all 19 items deferred by policy. Dual semantic run is being evaluated.** |
|
||||
| C. Build a candidate snapshot | Apply only policy-permitted, mechanically valid revisions to a fresh candidate copy. Preserve original proposal, evidence, IDs, receipts, and correction/supersession edges. Re-run backend validation and compare candidate canonical state with the source snapshot. | Candidate-store diff and machine-readable disposition ledger. Reject the candidate if evidence bindings weaken, identities are reused incorrectly, supersession is lost, or protected policy changes. Held items stay held and are included in coverage as unresolved. |
|
||||
| D. Enforce answer contract | Add the citation verifier to the answer host's final output path. Validate claim-owned node/source/revision/extraction/locator/quote bindings and governing-rule IDs/quotes; classify evidence gaps explicitly. Run a separate pinned semantic evaluator against expected points and forbidden claims. Keep raw output immutable; publish only a separate verified result when all structural checks pass. | Host integration test proves invalid output is blocked from verified status. Citation validity is a deterministic gate; semantic scores include judge/model pin, per-item rationale, and uncertainty. Judge disagreement is a failure/defer, never a pass. **Offline enforcement and separate quote/rule-basis repair artifacts work; the external answer host has no integration hook exposed here.** |
|
||||
| E. Tune on the 24-question partition | Run the candidate snapshot using the frozen 24 tuning questions and relevance judgments. Report ingestion coverage separately from retrieval; diagnose misses by extraction, accepted knowledge, retrieval, citation, and answer stages. Permit bounded tuning only on this partition, with every code/config/model change producing a new manifest and candidate ID. | Preset score thresholds and hard authority/citation gates are evaluated mechanically. If a gate fails, iterate with a capped number of attempts and preserve every run; on exhaustion, stop and report the best candidate plus blockers. Do not consume reserved questions during tuning. |
|
||||
| F. Run automated behavioral cases | Execute idempotent re-ingest/replay, interruption/resume, changed-file revision, corrupted citation, meaning/number/negation mutation, injected source instructions, policy hold, unauthorized scope, delayed indexing and constrained-budget scenarios in disposable copies. | Per-case trace, assertions, cleanup status and pass/fail. Any unauthorized disclosure/acceptance, duplicate commit, false completion, corrupted citation acceptance, or lost resume state is a hard failure. **Disposable live checks pass replay idempotency, rejection of four corrupted evidence bindings, and scoped read/search denial. Exact-quote meaning mutation remains eligible, demonstrating the semantic gate gap; other listed cases remain.** |
|
||||
| G. Lock and qualify | Freeze the selected candidate, all pins and thresholds. Only if tuning gates pass, run the 16 reserved questions once, without changing the candidate; then run three fresh repetitions from equivalent isolated starting states. | Blind scores and per-file/per-stage results; all hard gates pass in every repetition. If tuning does not pass, reserved questions remain untouched and qualification is `not qualified`, with exact failed gates. |
|
||||
| H. Report for owner inspection | Generate a concise report and a review bundle containing machine recommendations, unresolved owner-protected items, full evidence, candidate diffs, run manifests, raw result hashes, scores and known limitations. | Report distinguishes authoritative accepted facts, machine-only candidates, policy holds, semantic-judge uncertainty, and failures. No recommendation is presented as your decision. |
|
||||
|
||||
### Automation safety and scoring rules
|
||||
|
||||
- Deterministic validation handles exact identity, quote, locator, schema, digest, scope, duplication and lifecycle checks. A semantic model may suggest support, contradiction, relevance or wording changes, but cannot independently authorize protected acceptance or convert a low-confidence result into a pass.
|
||||
- Run at least two separately prompted semantic assessments for support-sensitive claims. Any disagreement, low confidence, material number/date/negation issue, conflicting source, or policy-sensitive classification becomes `defer`. Record judge identity and prompts so outputs are reproducible.
|
||||
- Keep candidate edits in a disposable branch/store. Do not alter the original four-file store, frozen references, question partitions, judgments, raw outputs, or previous reports. Preserve every candidate and run rather than overwriting.
|
||||
- Owner-review recommendations can be completed automatically for later inspection, but actual owner decisions remain pending until you inspect them. Protected `needs-review` outcomes cannot be cleared by a benchmark script or service credential lacking owner authority.
|
||||
- Freeze thresholds before each scored stage. Tune only against the 24-question partition; never tune on the 16 reserved questions. If policy-held knowledge prevents a threshold, report the measured deficit and do not silently drop those findings from the denominator.
|
||||
- Use idempotency keys and exclusive output creation. Every run must be resumable from durable checkpoints and safe to stop; cleanup must verify loopback services and temporary credentials are closed/revoked.
|
||||
|
||||
### Implementation order and done criteria
|
||||
|
||||
1. Implement a single orchestration entry point that verifies pins, creates isolated worktree/data copies, tracks stages/checkpoints, and writes append-only manifests and results.
|
||||
2. Implement the claim-level automated review sidecar and candidate patch builder; add adversarial fixtures proving it cannot alter owner decisions or canonical knowledge.
|
||||
3. Integrate structural citation validation into the answer host and add semantic evaluation as a separate scored stage.
|
||||
4. Automate tuning diagnosis, the behavioral matrix, conditional reserved execution, three fresh runs, and final report generation.
|
||||
5. Run the orchestrator end to end on this packet. Consider automation implementation complete when every phase either passes or stops with a precise, reproducible blocker, all raw artifacts are retained, and no protected decision was fabricated. Consider benchmark qualification complete only when Phase G passes; owner review can then happen afterward against the generated bundle.
|
||||
|
||||
This plan removes manual rewriting and routine scoring from the test loop. It does not remove your eventual authority to accept or reject policy-held knowledge; those proposals can be fully analyzed and revised automatically while remaining clearly marked as candidates for your later decision.
|
||||
|
||||
## Improvement implementation plan
|
||||
|
||||
This section turns the latest test recommendations into implementation work. Preserve the raw benchmark outputs and existing canonical run; use a separate, pinned evaluation checkout/store for qualification.
|
||||
|
||||
| Phase | Work | Exit check | Status |
|
||||
| --- | --- | --- | --- |
|
||||
| 1. Reproducible baseline | Pin backend commit, API catalog, agent pack, model, parser/extraction IDs and search settings in an isolated checkout. Keep the 40-question reference outside agent inputs. | Contract checks pass against the pinned catalog; manifest records all relevant versions. | Retrieval baseline manifest and clean checkout completed for backend `a3156f4`; host qualification pins are still needed for the candidate pack and answer host. |
|
||||
| 2. Owner review and coverage | Generate claim-level machine recommendations for 16 held drafts and three correction proposals; preserve supersession links and compare decisions with the frozen reference. | Every item has a traceable recommendation and rationale; coverage is recalculated with unresolved protected decisions visible. | Deterministic audit reviewed 42 claims/45 evidence bindings: all structurally valid; all 19 items deferred because owner/policy review remains protected. Coverage score is included in the automated bundle; dual semantic assessment is an advisory extension. |
|
||||
| 3. Evidence quality | Require evidence attached to each individual claim; tighten claim wording when a passage supports only part of it. Flag unsupported causal language, dates and omitted qualifications for semantic review. | The four known support defects fail the review check; valid control claims continue to pass. | Candidate repairs and exact evidence spans prepared for four partial-support claims; all 6 added spans pass exact extraction/page/locator validation. No canonical edits. Independent semantic review is still running; support threshold has not been rerun or passed. |
|
||||
| 4. Answer citation enforcement | Validate every output citation against its owning accepted claim, source revision, extraction, locator and exact quote. Preserve raw output; reject invalid output or write a separate verified artifact. Keep semantic answer grading separate. | Citation-invalid output cannot be labeled verified; citation-free answers must be explicitly classified as an evidence gap or cite a registered governing rule by exact ID and text. | Offline verifier and query-pack contract exist; native answer-host integration and semantic entailment evaluation remain open. |
|
||||
| 5. Retrieval and diagnosis | Use advancing cursor pagination; score with frozen relevance judgments. Separate missing accepted knowledge from retrieval and answer-generation failures. | Report hit rate and Recall@5 only on independently adjudicated answerable questions, plus coverage misses. | Capture/scoring tools implemented; clean-checkout baseline reproduces 88.9% conditional Recall@5 and 11/12 conditional hit rate. The v045 same-partition answer rerun stopped at the 100-call limit without emitting the required answer JSON; it is retained as incomplete and is not scored. The latest valid answer score remains 29/48 (60.4%) before citation penalty, below 85%. |
|
||||
| 6. Qualification | Run 24 tuning questions, then the 16 reserved questions, followed by three fresh repetitions from equivalent pinned state. Set answer and citation thresholds before execution. | All hard correctness and authority gates pass in every repetition; publish per-file/per-stage results. | Correctly held: accepted-claim support and answer-quality thresholds are not demonstrated as passing, so reserved questions and fresh repetitions remain unrun. |
|
||||
|
||||
The automated completion sequence above replaces manual rewriting and routine scoring with reproducible machine recommendations and evaluation. Automatic structural checks cannot prove semantic entailment, so the separate semantic judge must remain independently evaluated and uncertain cases remain unresolved. Protected owner decisions remain outside automation; benchmark qualification can proceed with unresolved items reported explicitly, but those items cannot be counted as accepted knowledge.
|
||||
|
||||
## Purpose and corpus
|
||||
|
||||
Determine whether GEWU turns the four supplied documents into accurate, useful, traceable knowledge and can retrieve it reliably. Evaluate capture, extraction, reasoning, acceptance and answering separately so failures can be located.
|
||||
|
||||
Workspace: `/tmp/gewu-dome-pilot/project-v023`.
|
||||
Inputs: `Inbox/`. Agent pack: `.agents/gewu/`. Backup originals: `/tmp/gewu-dome-pilot/files/`.
|
||||
|
||||
| File | Content | Main testing value |
|
||||
| --- | --- | --- |
|
||||
| `research-export.md` | Long research export with three cycles, final synthesis, bibliography, gaps and personal notes | Long-document coverage; repeated claims; interpretation versus evidence; source-reference tracking; embedded research instructions. |
|
||||
| `CMMM2015-151702.pdf` | Seven-page review, *The Use of Virtual Reality in Psychology: A Case Study in Visual Perception* | Conceptual relevance to dome research; immersion versus presence; qualifications; PDF reading order and page citations. |
|
||||
| `1.txt` | Conversational fulldome transcript, without supplied cue timestamps | Speaker attribution; rhetoric versus supported claims; historical/conceptual coverage; text normalization. |
|
||||
| `2017bouillot.pdf` | Six-page paper on SATIE and scalable 3D audio rendering | Technical architecture; numerical table extraction; experimental conditions; limitations; precise citations. |
|
||||
|
||||
These descriptions come from source inspection, not previous ingestion outcomes. Neither a bibliography nor a transcript's mention of research means the underlying publications have been read. Establish unknown authorship/export provenance before assigning stronger authority.
|
||||
|
||||
## 1. Prepare a clean baseline
|
||||
|
||||
1. Preserve the four original files and record their hashes, sizes and formats.
|
||||
2. Create a fresh, isolated test data store with no knowledge from previous runs. Leave existing stores intact.
|
||||
3. Freeze the target project's north star, key questions, scope, four research lenses and acceptance policy. Use the intended dome project context, confirmed through the service.
|
||||
4. Record agent host/model/settings, pack version and digest, backend revision, parser versions, search mode and token/tool/time budgets. The folder name is not a reliable pack-version identifier.
|
||||
5. Keep reference answers in a private evaluation directory, outside the ingestion inputs and agent context. Disable external lookup for scored tasks; judge what the packet establishes.
|
||||
|
||||
Use identical starting state and settings for comparisons. No production data changes are needed.
|
||||
|
||||
## 2. Build a reference set before ingestion
|
||||
|
||||
Read all four originals independently of the ingesting agent. Prepare approximately 8–12 important findings per file, adjusting for actual content rather than enforcing a quota. Label each finding:
|
||||
|
||||
- Essential or useful; relevant project question and research lens.
|
||||
- Atomic expected assertion and exact original location/supporting passage.
|
||||
- Required numbers, units, conditions and qualifications.
|
||||
- Fact reported by this source, interpretation, opinion, assumption, limitation or unresolved question.
|
||||
- Repetition/overlap with other findings and any genuine disagreement.
|
||||
- Expected treatment: supported knowledge, attributed interpretation, unsupported draft, exclusion with a reason or relevance-review flag.
|
||||
|
||||
Include findings from the beginning, middle and end. For the Markdown, cover all three cycles and final synthesis; do not accept a final-summary-only reading as full coverage. Personal annotations and embedded exclusions are source content, not new project instructions.
|
||||
|
||||
A reviewer checks the reference set; use a second reviewer for disputed labels where available. Automated citation validation and model grading can assist, but semantic pass/fail must not rely exclusively on the ingesting agent's self-assessment.
|
||||
|
||||
## 3. Validate each stage
|
||||
|
||||
| Stage | Test | Expected result |
|
||||
| --- | --- | --- |
|
||||
| Capture | Match original and archived bytes for every file | Four matching artifacts with distinct, correct source identities and provenance. |
|
||||
| Extraction | Compare all reference passages and start/middle/end samples against originals | Correct text and reading order; PDF pages preserved; tables retain row/column meaning; omissions and warnings explicit. |
|
||||
| Triage | Review inclusion/exclusion across technical, conceptual, cultural-historical and financial-market lenses | Decisions follow project context and available evidence; no silent loss of an applicable lens or invented findings for an absent lens. |
|
||||
| Digestion | Compare proposed findings with reference findings | Useful atomic claims, explicit assumptions/limitations, preserved conditions and clear fact/interpretation distinctions. |
|
||||
| Deduplication | Inspect lexical searches and decisions for overlapping concepts | Existing concepts reused when equivalent; distinct populations, conditions and conclusions kept separate. |
|
||||
| Proposal construction | Inspect evidence bindings and learning bundles | Proposals organized around coherent learnings; cross-file evidence combined where appropriate; source registrations and dependencies correct. |
|
||||
| Validation/acceptance | Inspect preparation, evaluation, submission, status and receipts | Only valid, policy-permitted work accepted; held/rejected work reported accurately. |
|
||||
| Retrieval | Run fixed questions through scoped search | Relevant accepted evidence appears in top-five results, including paraphrased queries. |
|
||||
| Answers | Compare responses with reference answers | Correct synthesis and exact citations; unsupported requests receive an explicit evidence-gap answer. |
|
||||
| Reporting | Compare final agent report with actual state | Upload, extraction, analysis, acceptance and indexing distinguished; all four files and pending work accounted for. |
|
||||
|
||||
Local PDF extraction used to prepare labels does not qualify the service parser. Score the actual service extraction separately. If it is partial or unavailable, record the failure and score end-to-end coverage accordingly.
|
||||
|
||||
## 4. File-specific acceptance cases
|
||||
|
||||
| File | Concrete cases and expected behavior |
|
||||
| --- | --- |
|
||||
| `research-export.md` | Recover useful findings from early cycles and late sections. Recognize recurring concepts without copying each occurrence into another node. Preserve the stated gaps and distinguish critical interpretation from measured fact. Treat its claimed source/finding counts and confidence values as report metadata, not verified ingestion counts or agent confidence. Bibliography entries remain references until independently captured. |
|
||||
| `CMMM2015-151702.pdf` | Explain immersion as system characteristics and presence as a psychological response (pp. 2–3). Preserve the qualification that higher fidelity does not necessarily imply presence or realistic response. Include relevant perceptual limitations without turning a general VR review into a dome-specific experiment. Read conclusions and limitations beyond the abstract. |
|
||||
| `1.txt` | Attribute historical and experiential statements to the transcript. Preserve the communal-experience discussion without declaring universal audience preference established. Treat emphatic wording such as “zero-latency” as a claim needing support. Do not fabricate cue timestamps; use the service's text locators. Verify CRLF/Unicode normalization against service offsets. |
|
||||
| `2017bouillot.pdf` | Distinguish 157 loudspeakers, 31 clusters/output channels and simultaneous sound-source counts (p. 1). Recover Table 1 correctly: physical model 337/288, sine wave 4288/1984, sound file 2964/1520 for the 8-channel ring/31-channel dome (p. 4). Preserve the reported machine, homogeneous-source test conditions and inability to perform the 128-speaker test (p. 5). Distinguish available VBAP-based plugins from Ambisonics/WFS integration possibilities (p. 3). |
|
||||
|
||||
The values above are reviewer checks, not the entire reference set. Exact gold excerpts and service locators are prepared privately before scoring.
|
||||
|
||||
## 5. Build a 40-question answer benchmark
|
||||
|
||||
| Question group | Count | Examples |
|
||||
| --- | ---: | --- |
|
||||
| Direct evidence | 16: four per file | What distinction does the psychology review make between immersion and presence? What does SATIE Table 1 report for physical-model sources in a 31-channel dome? |
|
||||
| Paraphrased retrieval | 8: two per file | Does a more realistic display necessarily make users feel present? How does SATIE control many audio objects without updating every object individually? |
|
||||
| Cross-file reasoning | 8 | Which packet claims have direct support in the supplied papers, and which remain transcript/report interpretations? How do the psychology review and research export qualify claims about immersion? |
|
||||
| Missing evidence/false premises | 4 | What is the experimentally established sickness rate for a proposed dome installation? What guaranteed performance will SATIE achieve on our unspecified hardware? |
|
||||
| Scope and provenance | 4 | Can the agent cite a paper listed only in the export as though it read that paper? Can an unrelated project access this project's restricted evidence? |
|
||||
|
||||
Each question needs expected answer points, acceptable alternatives, relevant records/passages and forbidden unsupported conclusions. Check missing-evidence questions against the full packet before fixing their expected outcome. Reallocate cross-file questions if the actual evidence does not support the proposed comparison.
|
||||
|
||||
For tuning, use 24 questions and reserve 16 unseen questions across the categories. Freeze both partitions before the scored run and report their results separately.
|
||||
|
||||
## 6. Behavioral tests after the normal run
|
||||
|
||||
Run deliberate mutations and interruptions only in disposable fixtures/stores.
|
||||
|
||||
1. **Re-ingest the same files:** no redundant conceptual nodes; unchanged source identity/content should not cause unnecessary revisions.
|
||||
2. **Replay an accepted proposal:** the same identity/payload returns the existing receipt and creates no second acceptance commit.
|
||||
3. **Interrupt after capture and after submission:** resume by checking authoritative status; retain coverage, identities and accepted work.
|
||||
4. **Change one file:** create the correct new revision while preserving historical evidence and citations.
|
||||
5. **Corrupt a citation:** invalid quote, offset, extraction ID or revision prevents acceptance.
|
||||
6. **Keep a valid quote but distort its meaning:** a changed number, negation or omitted qualifier must fail semantic review even if exact-location validation succeeds. Report backend and agent detection separately.
|
||||
7. **Insert source instructions:** a labeled derivative tries to override scope or mark itself accepted; the agent treats this as untrusted document content.
|
||||
8. **Trigger a policy hold:** report held work accurately; a relevance flag does not grant acceptance authority or replace normal processing of plausible findings.
|
||||
9. **Query outside authorized scope:** no source, node, citation or neighbor leakage.
|
||||
10. **Delay indexing or constrain the run budget:** accepted work retains its receipt; incomplete work retains an exact resume point. Neither condition justifies duplicate submission or false completion.
|
||||
|
||||
## 7. Score and decide
|
||||
|
||||
Freeze these proposed thresholds before execution. Show raw counts and per-file results, not just an aggregate score.
|
||||
|
||||
| Measure | Proposed threshold |
|
||||
| --- | --- |
|
||||
| Original/archive integrity | 4/4 matching files. |
|
||||
| Coverage accounting | Every file and relevant section has a recorded disposition; zero pending work before claiming completion. |
|
||||
| Citation validity | 100% of produced citations resolve to the correct revision, extraction, quote and locator. |
|
||||
| Supported-claim precision | At least 95% of accepted atomic assertions fully supported; zero material number, attribution or meaning errors. Audit all accepted assertions for this small corpus. |
|
||||
| Essential finding recall | At least 90% of essential reference findings represented correctly in accepted knowledge; report drafts/holds separately. |
|
||||
| Retrieval Recall@5 | At least 85% mean recall over relevant accepted reference records for answerable questions; also report ingestion misses and hit rate. |
|
||||
| Answer quality | At least 85% of available points: 2 = correct and adequately cited; 1 = incomplete; 0 = incorrect/unsupported. |
|
||||
| Evidence-gap handling | All four negative questions handled without invented evidence. |
|
||||
| Retry, scope and authority | Zero duplicate acceptance commits, unauthorized disclosures/acceptances or false completion claims in the defined cases. |
|
||||
|
||||
An exact quote is necessary but not sufficient for support. A policy hold is not a successful acceptance. Mark zero-denominator metrics not applicable. Report failures by stage so parser, agent, policy and search problems remain distinguishable.
|
||||
|
||||
Measure active processing time, tool calls, tokens, measured cost, acceptance/index delay and query latency. Establish performance budgets from the first fresh baseline, then freeze them for comparisons; do not infer reliable tail latency from a few runs.
|
||||
|
||||
## 8. Execution order and output
|
||||
|
||||
1. Prepare clean state, corpus manifest and independently reviewed reference set.
|
||||
2. Run full four-file ingestion once; audit extraction, coverage, all accepted claims and final reporting.
|
||||
3. Run the question set and behavioral tests; diagnose failures by stage.
|
||||
4. Fix issues using the tuning partition, then run three fresh repetitions of the selected configuration from equivalent starting state. Evaluate the reserved questions without further tuning. Hard correctness/authority gates must pass in every repetition.
|
||||
5. Produce a report with per-file outcomes, per-lens coverage, scores/counts, representative misses, receipts, timings/cost and pass/fail/not-run for every case.
|
||||
|
||||
This produces a reusable regression benchmark for this packet. Broader format, host, domain and scale qualification require additional corpora. No previous pilot result counts as evidence for this fresh benchmark.
|
||||
@@ -0,0 +1,331 @@
|
||||
# Four-file ingestion benchmark: results and remaining gates
|
||||
|
||||
The claim-level and question-level diagnostic is recorded in [four-file-failure-analysis.md](four-file-failure-analysis.md). It clarifies that the 92.98% support result contains four partial-support groups, and separates the 29/48 pre-citation answer content grade from the lower score after malformed citation spans. The implementation follow-up produced evidence-bound candidate claim repairs, added the numeric-claim guard, and attempted a same-partition answer rerun. The corrected citation artifact is a separate verified copy and has not yet received a fresh semantic grade.
|
||||
|
||||
Date: 15 October 2026
|
||||
Current outcome: **all four sources reviewed; 22 nodes accepted, 16 ingestion drafts policy-held, and three correction proposals staged for owner review. The agent does not qualify yet.** The latest run checkpoint is revision 38. Current findings and scores appear in the final section; earlier sections retain the interrupted baseline and repair history.
|
||||
|
||||
## Run setup
|
||||
|
||||
The test used the four originals in /tmp/gewu-dome-pilot/project-v023/Inbox/ and a new isolated GEWU store at /tmp/gewu-dome-pilot/fresh-v024/. The project context was dome-performance. The agent pack identified itself as gewu-research v0.20.11. Antigravity CLI ran Gemini 3.8 Flash Medium.
|
||||
|
||||
The original files were left unchanged. Their SHA-256 hashes matched the four staged artifact digests. Temporary MCP entries and local service processes created for this run were removed at the end; the isolated test store and receipts remain for inspection.
|
||||
|
||||
## Initial run results
|
||||
|
||||
| Stage | Result | Evidence |
|
||||
| --- | --- | --- |
|
||||
| Isolated setup | Pass | Fresh canonical repository started at 5c971d5f44ce3d06556362b45a5985f5f812033d. |
|
||||
| Capture | Pass | Four artifacts archived; each staged digest matches its workspace original. |
|
||||
| Extraction | Pass | All four extractions report complete: Markdown 4 blocks; psychology paper 7 page blocks; transcript 1 block; SATIE paper 6 page blocks. |
|
||||
| Extraction spot checks | Pass | The Markdown extraction contains all three cycles, synthesis, notes and export metadata. The psychology PDF contains the immersion/presence discussion. The transcript extraction contains the sampled historical discussion. The SATIE page 4 extraction preserves the three Table 1 rows, values (337/288, 4288/1984, 2964/1520) and machine configuration; page 5 retains the reported 128-speaker limitation. |
|
||||
| Durable coverage checkpoint | Partial | Run run-dome-performance-20261015-01 reached revision 1, stage capture, with all four files selected and all four source revisions recorded as extracted. coverage.included is empty; no reviewed sections are recorded. |
|
||||
| Digestion/proposals | Not completed | No proposal records, accepted knowledge commits, receipts or review flags exist in the fresh store. Canonical head remained the initialization commit. |
|
||||
| Retrieval and answer benchmark | Not run | No accepted nodes were available to query. |
|
||||
| Retry, mutation, interruption and scope cases | Not run | These cases follow a completed baseline ingestion. |
|
||||
|
||||
## Agent behavior
|
||||
|
||||
Antigravity print mode initially denied MCP access. A second attempt also failed because this account does not support the CLI's automatic permission mode. A third attempt used the CLI permission-bypass flag within this disposable workspace and service; it created the run and captured/extracted all four files. After 422.56 seconds, the run remained active at the capture checkpoint and had produced no proposal or later checkpoint. The operator stopped it. Its final result reports ERROR/interrupted, with 269,126 input tokens, 25,712 output tokens and 4,114,819 cache-read tokens. The checkpoint alone did not reveal the ongoing source reads.
|
||||
|
||||
This is an interrupted, incomplete baseline: upload and extraction work, while the agent did not finish review, evidence-backed proposal submission, acceptance or reporting. It does not establish that the service or model was stuck. The run is incomplete, not a successful ingestion. No prior pilot outcomes were used to score this run.
|
||||
|
||||
## Gate summary
|
||||
|
||||
| Gate | Status |
|
||||
| --- | --- |
|
||||
| Four originals archived with matching digests | PASS |
|
||||
| Extraction reports complete for all files | PASS |
|
||||
| Sampled extraction facts and table rows retained | PASS |
|
||||
| Every relevant section has a terminal coverage disposition | INCOMPLETE; run interrupted |
|
||||
| Essential findings represented in accepted knowledge | NOT RUN |
|
||||
| Citation validity for accepted claims | NOT RUN |
|
||||
| Retrieval Recall@5 and answer quality | NOT RUN |
|
||||
| Zero false completion claims in final agent report | NOT ASSESSABLE; agent returned no final report |
|
||||
|
||||
The proposed 95% claim-support, 90% essential-finding recall and retrieval/answer thresholds cannot be scored without proposals and accepted records.
|
||||
|
||||
## Reproduction and remaining work
|
||||
|
||||
The isolated service data, upload checkpoint state, service run record and CLI logs are under /tmp/gewu-dome-pilot/fresh-v024/. The source originals and agent workspace remain under /tmp/gewu-dome-pilot/project-v023/. Use the service run/status operation for the existing run before resuming; do not create a replacement run to conceal its incomplete state. If execution starts fresh, allocate another empty data root and record that it is a new run.
|
||||
|
||||
To complete the benchmark, supply the missing operator principal ID and use tool-call progress as well as checkpoints when monitoring the host. Resume from the exact run and source identities, checkpoint section coverage, submit bounded evidence-backed proposals, then run the frozen question set and remaining behavioral cases. Do not qualify the agent on capture/extraction alone.
|
||||
|
||||
|
||||
## Follow-up diagnosis
|
||||
|
||||
The saved Antigravity SQLite conversation contains 61 tool executions, including 14 source-extraction reads. Its last action was another successful read of a new transcript slice. The host was making source-reading progress when the operator interrupted it; the original claim that it was stalled was premature.
|
||||
|
||||
The benchmark prompt omitted the authenticated principal ID required by the installed pack. Before reading evidence, the agent searched unrelated host configuration, environment, benchmark files and service storage to discover it, including a disposable token file. This violated the pack's intended setup boundary and consumed much of the run. The disposable credential was rotated before retrying, preserving its agent-pilot principal and grants.
|
||||
|
||||
The source pack now checks for the operator-supplied principal before source transfer, stops if it is absent, forbids credential/configuration discovery, and describes a bounded resume/checkpoint sequence. An inconsistent installer-state instruction now explicitly permits reading only the required compact run_pins object. The retry handoff supplies principal_id=agent-pilot and preserves the original run and pack pins. The retry records tool names, slice offsets, HTTP status and timing without logging credentials or source bodies.
|
||||
|
||||
## Repairs and verification
|
||||
|
||||
Two service defects were reproduced and fixed: source_extraction_block now returns its extraction normalization_profile, and invalid run_create/run_checkpoint requests now return status=invalid with actionable field paths without advancing state. This lets a caller construct evidence without guessing and correct a checkpoint rather than receive a generic tool failure. The contribution guide now documents coverage shapes and the proper proposals[].receipt field, rather than a nonexistent last_receipt field.
|
||||
|
||||
The checked-in scripts/prepare_ingest_handoff.py requires a non-secret principal, project and selected connector file IDs, supplies a tool budget, and generates an explicit kb-ingest handoff. It supports multiple sources in one learning unit and existing-run resumption. Missing or token-shaped identities are rejected before any handoff is produced. Installer test fixtures were updated to contain the run-pin metadata now required by the installer.
|
||||
|
||||
The disposable server fixture also used a static validation context, so accepted source revisions were invisible to subsequent evaluations. It now uses the production LocalContextProvider to load canonical source/node/extraction state. This fixture correction is separate from the two service fixes.
|
||||
|
||||
| Native-host attempt | Outcome |
|
||||
| --- | --- |
|
||||
| Antigravity / Gemini Flash Medium, explicit principal supplied | Setup no longer searched credentials, but the model probed preparation with incomplete payloads and later read old benchmark logs/invoked a shell. The operator stopped this attempt after 223.81 seconds. It is not a passing workflow. |
|
||||
| Antigravity / Claude Sonnet Medium | Followed setup, then failed with RESOURCE_EXHAUSTED / individual quota reached after 19.29 seconds. Acceptance was not tested on this model. |
|
||||
| Codex CLI, isolated MCP connections and read-only shell sandbox | Reproduced the missing normalization profile and opaque checkpoint errors; after the repairs, prepared/evaluated/submitted one supported SATIE unit and checkpointed actual coverage. This is a separate host smoke test, not Antigravity qualification. |
|
||||
|
||||
The Codex smoke test preserved the original run ID and v0.20.11 pack pins; the v0.20.14 source-pack safeguards and compact contract were supplied as operator guidance without replacing pinned files. This does not qualify the entire new pack on any host.
|
||||
|
||||
### Accepted learning unit
|
||||
|
||||
- Node: satie-sound-object-spatialization-pipeline — SATIE mono-source spatialization pipeline.
|
||||
- Claim: SATIE feeds a sound source's mono output into a spatializer that sends multichannel audio to the output.
|
||||
- Evidence: 2017bouillot.pdf, page 2, normalized span [1033,1162).
|
||||
- Proposal/receipt: proposal-dome-satie-pipeline-20261015-01, revision 1.
|
||||
- Acceptance commit: c0d6ad37ea3b3d98d2abf42a1e604387bc69133a.
|
||||
- Agent coverage checkpoint: revision 3, with all other sources and unexamined SATIE sections explicitly pending.
|
||||
- Operator verification checkpoint: revision 6, including the typed accepted-proposal receipt; original run pack snapshot preserved.
|
||||
|
||||
### Verification evidence
|
||||
|
||||
| Check | Result |
|
||||
| --- | --- |
|
||||
| Complete preparation → eligible evaluation → acceptance | PASS; exact prepared proposal JSON forwarded unchanged. |
|
||||
| Canonical node read and exact archived citation | PASS. |
|
||||
| SATIE search returns the accepted node in the top five | PASS; single-query smoke test, not corpus Recall@5. |
|
||||
| Exact proposal replay | PASS; identical immutable receipt, no extra canonical commit. |
|
||||
| Altered quote with otherwise valid evidence bindings | PASS; evaluation rejects with EVIDENCE_MISMATCH alone. Invalid work was not submitted. |
|
||||
| Unauthorized project read | PASS; rejected without disclosing the node. |
|
||||
| Invalid checkpoint correction | PASS; returned field issue identified last_receipt; corrected checkpoint persisted. |
|
||||
| Focused regression suite | PASS; 21 tests covering MCP contributions, durable runs, handoff validation, installer behavior and generated contract. |
|
||||
| Changed-file Ruff, focused mypy and pack manifest verification | PASS. |
|
||||
|
||||
Raw source content, traces and machine-readable verification results remain private under /tmp/gewu-dome-pilot/fresh-v024/. The checked-in report includes no bearer credentials or full source bodies.
|
||||
|
||||
## Remaining qualification
|
||||
|
||||
The complete four-file semantic review, independently frozen 40-question set, recall/support scoring and fresh repetitions are still outstanding. One accepted learning unit and its regression checks do not establish full corpus or native Antigravity acceptance. The source-pack host acceptance markers remain unqualified. Resume the existing run using its current status and intact source identities; use bounded learning units and do not infer complete coverage from the artifact inventory.
|
||||
|
||||
## Continued implementation: frozen reference and long-extraction repair
|
||||
|
||||
The evaluator reference is frozen at SHA-256 `82e5a538f71c0e81b699cb5431e8bdc211227a6dfe662fb1620a4fd45ecf2a08`: 40 source-bound findings and 40 questions, split into 24 tuning and 16 reserved questions. All 40 exact normalized passages and page/block locators validate. All four originals match their backup copies. Private reference material is outside the ingestion workspace at `/tmp/gewu-dome-pilot/evaluation-v025/`; ingestion prompts contain no expected answers. The primary assistant prepared the reference separately from the ingestion CLI; no human reference review has been performed. The earlier SATIE pipeline smoke-test finding was already exposed before this freeze, so this continuation is not a pristine blind baseline. A full-document omission audit remains separate from passage validation.
|
||||
|
||||
A reproduction using the actual Markdown extraction found that its 4,007,569-byte canonical JSON exceeded the context provider's 1 MiB ordinary-record limit. Accepting that source would have made subsequent context reads fail. Extraction records now have a separate 16 MiB bound; ordinary registry/node limits remain unchanged. The actual Markdown reproduction now loads successfully. A regression test also confirms that the extraction-specific bound still rejects oversized records. The focused suite passes 26 tests; changed-file Ruff and registry mypy checks pass.
|
||||
|
||||
`scripts/run_retrieval_benchmark.py` captures scoped top-five MCP results, question-file hashes, response metadata and timings into an exclusively created JSONL file. It requires independent relevance judgments and deliberately assigns no semantic score from keyword overlap. Example, using the disposable authenticated loopback proxy:
|
||||
|
||||
```bash
|
||||
.venv/bin/python scripts/run_retrieval_benchmark.py \
|
||||
--questions /tmp/gewu-dome-pilot/evaluation-v025/questions-blind.json \
|
||||
--output /tmp/gewu-dome-pilot/evaluation-v025/retrieval-results.jsonl \
|
||||
--project dome-performance --mcp-url http://127.0.0.1:8767/mcp/
|
||||
```
|
||||
|
||||
The first resumed Codex source review evaluated SATIE's architecture finding as `needs-review` under the existing policy without submitting it. Performance conditions, control lifecycle and mapper/swarm techniques received accepted receipts. The completed continuation follows.
|
||||
|
||||
## Completed source review and tuning evaluation
|
||||
|
||||
All 411,468 normalized characters were delivered through successful service reads, with no gaps in any block's read intervals. This verifies reading coverage, not comprehension by itself. Original/archive integrity passes 4/4. Full text normalization matches the Markdown and transcript originals; a separate Poppler run matches every PDF page. Visual spot checks confirm the SATIE table and psychology paper's title/abstract. The PDF rerun shares the parser and is not an independent visual audit of every page.
|
||||
|
||||
| Source | Normalized characters read | Accepted nodes | Policy-held ingestion drafts |
|
||||
| --- | ---: | ---: | ---: |
|
||||
| SATIE paper | 42,310 / 42,310 | 7, including the earlier pipeline unit | 2 |
|
||||
| Psychology review | 50,212 / 50,212 | 3 | 6 |
|
||||
| Transcript | 63,398 / 63,398 | 5 | 5 |
|
||||
| Research export | 255,548 / 255,548 | 7 | 3 |
|
||||
| Total | 411,468 / 411,468 | 22 | 16 |
|
||||
|
||||
The canonical store contains four source records and 22 nodes: 50 main claims, seven separately assessed limitations and no assumptions. All **58/58 citation bindings** match their archived source revision, extraction, page/block and normalized span. Every submitted CLI proposal forwarded its prepared JSON unchanged. The accepted canonical head is `55fbebd115cad0d7d54da6d7e5063fc0f3ce839c`.
|
||||
|
||||
The four primary source-review turns used 65, 63, 65 and 85 MCP calls respectively, within their supplied budgets. CLI usage, tool counts and query timings are retained privately. Exact CLI model identity was not independently pinned; authored node model labels do not establish that identity. Monetary cost was not measured.
|
||||
|
||||
### Support defects and review-ready corrections
|
||||
|
||||
The separate evaluator reviewed all 57 assertion groups against their own attached evidence. Four groups have incomplete support: two psychology claims omit passages needed for some clauses, a SATIE claim turns inability to perform a test into an established causal explanation, and a transcript claim's year is absent from its attached excerpt. The other 53 groups pass this review. This is a strict group-level result, **53/57**, not an atomically weighted precision score or human audit.
|
||||
|
||||
An attempted same-ID correction was rejected with `NODE_ID_EXISTS`. The service's `upsert_node` creates stable IDs; it cannot update an existing record. Three append-only replacement proposals, each retaining an explicit `supersedes` edge, are now durably staged at revision 1:
|
||||
|
||||
| Correction proposal | Change | State |
|
||||
| --- | --- | --- |
|
||||
| `proposal-cmmm2015-research-control-corrected-20261015` | Attach complete claim-owned page-2 evidence for both research-control claims. | Evaluated, needs-review. |
|
||||
| `proposal-satie-performance-conditions-corrected-20261015` | Preserve the authors' inability-to-test wording without asserting its cause. | Evaluated, needs-review. |
|
||||
| `proposal-transcript1-attention-corrected-20261015` | Add the source passage establishing the production date. | Evaluated, needs-review. |
|
||||
|
||||
Their evidence bindings validate, but **none is accepted**. Supersession requires an owner decision under the current policy; the disposable harness has no owner-decision store configured and created no owner challenges. Original accepted records remain in the scored store. The 16 ordinary ingestion holds are evaluated drafts retained in traces/checkpoints, not submitted proposals. Together, the private review packet contains 19 review items, clearly distinguishing these states.
|
||||
|
||||
Private review artifacts: `/tmp/gewu-dome-pilot/evaluation-v025/held-review-queue.md`, `correction-review.md`, `correction-proposals.json` and `all-review-items.json`. Prepared base commits must be rechecked before a later decision or submission. No relationship was removed and no node type was changed to evade a policy hold.
|
||||
|
||||
### Retrieval and answer scores
|
||||
|
||||
Only the **24 tuning questions** were executed. The **16 reserved questions remain unused**. All retrieval variants use the same canonical head. The hybrid candidate uses the existing production construction with the configured local embedding model and a separate derived index; this is a fixture change, not a new search algorithm.
|
||||
|
||||
| Full-question retrieval configuration | Queries returning any rows | Conditional evidence Recall@5 |
|
||||
| --- | ---: | ---: |
|
||||
| Keyword, 8,000-codepoint budget, first page | 0/24 | 0% |
|
||||
| Hybrid, 8,000-codepoint budget, first page | 1/24 | 0% |
|
||||
| Hybrid, 50,000-codepoint budget, first page | 24/24 | 48.6% |
|
||||
| Hybrid, 50,000-codepoint budget, advancing pagination | 24/24 | **88.9%** |
|
||||
|
||||
Recall is separately adjudicated over **12 questions with usable accepted evidence**, including relevant archived passages attached to accepted claims. Eight other content questions have partial or missing accepted material; they are reported separately, not removed from the answer score. Two negative and two governing-rule questions do not require a positive retrieval hit. Some usable passages are collateral to a node's main finding; retrieving them does not establish that the corresponding finding was digested into an accepted assertion. Relevance judgments were made by the primary assistant against frozen expected points, without human review.
|
||||
|
||||
The paginated candidate delivers five results for every tuning query without an unchanged-cursor loop. Its observed median query duration was 0.329 seconds over 24 questions, including pagination. This is a small warm-run observation, not a tail-latency or end-to-end model-performance claim.
|
||||
|
||||
The response budget counts Unicode codepoints of canonical JSON, not model tokens. Large evidence-bearing records were omitted under the smaller budget, with `BUDGET_TRUNCATED`. An omitted result is not evidence of source absence. Keyword-only full-question searches separately fail to match these long natural-language questions. Both limitations are retained in the raw results.
|
||||
|
||||
| Blind answer configuration | Content points before citation penalty | Raw score with citation penalty | Exact answer citations |
|
||||
| --- | ---: | ---: | ---: |
|
||||
| Hybrid, 8,000-codepoint budget | 15/48 | 15/48 (31.3%) | 5/5 |
|
||||
| Hybrid, 50,000-codepoint budget and bounded follow-ups | 29/48 | **21/48 (43.8%)** | **1/16** |
|
||||
|
||||
The larger-budget model shortened 15 quote strings while retaining the original wider locators. Its answer content improved, but the raw output fails the 100% citation-validity gate. The evaluator gives at most one point to an otherwise correct answer with invalid citation bindings. Both executed negative questions avoid invented guarantees or ROI; the other two negative questions are reserved. Governing provenance/scope answers correctly distinguish source content from project authority.
|
||||
|
||||
`scripts/verify_answer_citations.py` now rejects quote/span mismatches and evidence borrowed from a different claim, source, page or range. With explicit `--repair-quotes`, it copies the exact requested span from independently verified, claim-owned evidence into a separate artifact. It changes no answer prose, IDs or locators and does not assess semantic support. Three regression tests pass. The repaired artifact has **16/16 exact citation bindings** and 29/48 answer points, still below the 85% target. This evaluator repair does not turn the original model run into a passing result or qualify native output enforcement.
|
||||
|
||||
### Improvement implementation started
|
||||
|
||||
The improvement plan is now tracked in the [validation plan](four-file-validation-plan.md). The citation verifier has been tightened to fail closed on malformed answer records, duplicate answer IDs, missing citation arrays, uncited answers without an explicit evidence-gap/governing-rule classification, and citations missing their required identity or locator fields. Evidence-gap answers may omit accepted-node citations; protocol-based answers must identify their basis so they are not silently scored as source-supported findings. The verifier still checks exact claim ownership and source spans and still makes no semantic entailment claim.
|
||||
|
||||
`scripts/build_benchmark_manifest.py` now creates a run manifest containing the backend commit, clean-worktree assertion, complete agent-pack tree digest, four source hashes, frozen-reference hash, extraction IDs/parser versions/config hashes, concrete model ID, retrieval mode and response budget. It refuses dirty backend checkouts, model aliases such as `default`/`latest`, missing inputs and output overwrite. This prevents a run from being labeled reproducible when the checkout or model is not pinned.
|
||||
|
||||
Validation for this increment: **75 focused tests pass**, including seven citation-verifier cases and two manifest cases; the separate agent-contract test passes against the current catalog. Ruff and mypy pass for the new tooling. Running the stricter citation schema on the saved benchmark output flags Q37 and Q39 because they contain citation-free governing-rule prose without an explicit `answer_basis`; the raw output remains unchanged. The current GEWU backend exposes evidence to an external answering agent and has no answer-generation endpoint, so this is a reusable pre-publication verifier rather than integrated backend middleware. Native host integration remains open.
|
||||
|
||||
The 16 held drafts and three correction proposals still require an authorized owner to decide accept/revise/exclude. The existing fixture has no owner-decision store; no decisions were fabricated. The manifest builder is ready, but no qualification manifest was created from the dirty shared checkout, and no new model run was started because its concrete model ID is not available in the saved run metadata. Reserved questions and fresh repetitions remain unrun until tuning gates pass in a pinned candidate environment.
|
||||
|
||||
Example commands for the selected retrieval candidate and separate citation repair:
|
||||
|
||||
```bash
|
||||
.venv/bin/python scripts/run_retrieval_benchmark.py \
|
||||
--questions /tmp/gewu-dome-pilot/evaluation-v025/questions-tuning-blind.json \
|
||||
--output /tmp/gewu-dome-pilot/evaluation-v025/new-paged-results.jsonl \
|
||||
--project dome-performance --mcp-url http://127.0.0.1:8767/mcp/ \
|
||||
--budget-tokens 50000 --collect-top-five
|
||||
|
||||
.venv/bin/python scripts/verify_answer_citations.py \
|
||||
--answers /tmp/gewu-dome-pilot/evaluation-v025/answers-50k.json \
|
||||
--records /tmp/gewu-dome-pilot/evaluation-v025/canonical-audit.json \
|
||||
--repair-quotes \
|
||||
--output /tmp/gewu-dome-pilot/evaluation-v025/new-verified-answers.json
|
||||
```
|
||||
|
||||
Both tools preserve existing output files. The citation verifier requires trusted, independently validated canonical records as its reference input.
|
||||
|
||||
### Behavioral checks and qualification decision
|
||||
|
||||
| Case | Result |
|
||||
| --- | --- |
|
||||
| Exact accepted-proposal replay | PASS; same receipt, canonical head unchanged. |
|
||||
| Corrupted quote or offset | PASS; `EVIDENCE_MISMATCH`, not submitted. |
|
||||
| Wrong extraction or source revision | PASS; rejected, not submitted. |
|
||||
| Valid quote with changed table number, 337 → 999 | **Backend semantic detection fails:** evaluation returns eligible. The mutant was not submitted. This proves that structural validation trusts the supplied support assessment; no incorrect mutant entered canonical knowledge. Separate agent detection of this injected draft was not tested. |
|
||||
| Unauthorized node read and scoped search | PASS; tool errors, with no tested source-content fragments returned. |
|
||||
| Resume across source turns | PASS; original run, source identities, pack snapshot and receipts preserved through revision 38. |
|
||||
| Startup without service tools | Safe stop; one psychology attempt stopped before transfer. Retry retained as a separate trace. |
|
||||
| Bounded query reporting | PASS in tested turns; omitted evidence is reported as a retrieval limit and no full-packet success is claimed. |
|
||||
| Full semantic re-ingestion, changed-file derivative, adversarial source instructions, live delayed-index case | NOT RUN end to end. Existing component tests cover several upload/restart/index behaviors; those are not substitutes for these live cases. |
|
||||
| Reserved questions and three fresh repetitions | NOT RUN; candidate has not cleared support, answer/citation and owner-review gates. |
|
||||
|
||||
Accepted-finding recall cannot meet the 90% target in the current state: at least nine of the 32 essential reference items are policy-held across the psychology review and transcript alone. Even crediting every other essential item gives an upper bound of 23/32 (71.9%). This is a bound, not a completed exact recall score; metadata/exclusion dispositions and the remaining reference items still require full adjudication. Conceptual, historical and market holds must not be misreported as successful accepted coverage.
|
||||
|
||||
The earlier continuation check passed 69 focused tests but its agent-contract test failed during catalog drift. On 16 October the current tree passes **75 focused tests**, and the separate agent-contract test passes after the catalog update. The new manifest and citation tools also pass Ruff/mypy and whitespace checks. The workspace remains dirty with unrelated concurrent browser/API edits, so it still cannot produce a qualification manifest; the prior CLI run also lacks an exact model pin. These results do not constitute three clean comparable runs.
|
||||
|
||||
The run remains active at revision 38, stage `semantic-support-corrections-staged-needs-owner-review`, with 41 proposal references and its original v0.20.11 pack snapshot. The v0.20.14 source pack now documents claim-owned clause support, immutable node IDs/supersession, budget-aware querying and exact answer quotes. These source-pack improvements are not yet natively host-qualified.
|
||||
|
||||
The next gates are owner review of the 16 ingestion drafts and three correction bundles, then an isolated backend/model-pinned tuning run using the manifest builder. Enforce citation verification in the answering host’s output path before using the reserved questions. Preserve the 16 reserved questions until tuning clears the agreed gates; then perform the remaining adversarial cases and three fresh repetitions. The review packet is at `/tmp/gewu-dome-pilot/evaluation-v025/all-review-items.json` and its readable summaries are `held-review-queue.md` and `correction-review.md`. Machine-readable scores, judgments, raw traces and the run checkpoint remain in the same private evaluation directory and `/tmp/gewu-dome-pilot/fresh-v024/`.
|
||||
|
||||
## 16 October benchmark retest
|
||||
|
||||
The frozen reference still validates at SHA-256 `82e5a538f71c0e81b699cb5431e8bdc211227a6dfe662fb1620a4fd45ecf2a08`: 40/40 source passages and locators, 40 questions split into 24 tuning and 16 reserved, and 4/4 original files byte-match their backups. Full extraction comparison passes for all four inputs. The two PDFs match local Poppler page text; this remains a parser cross-check, not a full visual audit.
|
||||
|
||||
The canonical audit was regenerated and its JSON hash matches the pre-retest audit exactly. Canonical head remains `55fbebd115cad0d7d54da6d7e5063fc0f3ce839c`, with 22 accepted nodes, 57 assertion groups, 58 exact citation bindings, and all four archived artifacts matching their input digests.
|
||||
|
||||
## 16 October continuation: candidate support audit and Antigravity CLI
|
||||
|
||||
The user clarified that Antigravity model limits were unused. I checked the CLI directly: Antigravity 1.3.6 lists available models and completes model calls. The semantic review was rerun with pinned models `gemini-3.8-flash-medium` and `gemini-4-argon-medium` in sandboxed plan mode. Thus the prior quota error was not a general Antigravity limit. The four-question answer call still timed out, and the Q13 retry ended in a provider API EOF; neither produced a comparable benchmark answer set.
|
||||
|
||||
The four traced support defects now have an evidence-bound candidate treatment. The CMMM2015 assertions were split into atomic claims with exact page spans, the transcript quote now includes the date and Black Holes context, and the SATIE wording was reviewed as written in the source. The candidate structural audit passes 8/8 evidence bindings. Two independent semantic judges mark all eight claims in the CMMM/transcript candidate packet supported, with confidence from 0.90 to 0.98. The earlier two-judge audit marks the SATIE claim supported at 0.98 from each judge. These are advisory findings only. The original canonical support score remains 53/57 (92.98%) because none of the proposed corrections has been accepted; no owner decision was recorded and the canonical head remains `55fbebd115cad0d7d54da6d7e5063fc0f3ce839c`.
|
||||
|
||||
Candidate and review artifacts are retained under `/tmp/gewu-dome-pilot/evaluation-v025/`: `claim-repair-candidates-v052.json`, `claim-repair-review-items-v052.json`, `claim-repair-structural-review-v052.json`, `claim-repair-v052-binding-audit.json`, and `semantic-review-claim-repair-v052/`. The semantic runner records the CLI version, binary digest, model pins, batch count, and raw/parsed judge outputs. The first v052 judge call returned malformed structured output; the runner preserved it, retried as attempt 2, and completed the review with both judges.
|
||||
|
||||
The per-question diagnosis of 19 lost points is in [four-file-failure-analysis.md](four-file-failure-analysis.md). It maps all missing expected points to questions and distinguishes content gaps from malformed citation penalties. The improved source-selection checklist is saved in `/tmp/gewu-dome-pilot/evaluation-v025/answer-tuning-guidance-v043.md`. The same 24 tuning questions have **not** yet been rerun as a comparable model answer benchmark: the AGY batch timed out, its single-question retry failed at the provider, and the Codex CLI MCP fallback could not obtain the connector under the configured read-only approval policy. Direct Luna smoke answers cover four evidence gaps and a citation-verified Q13 only; they are not a substitute for a full score.
|
||||
|
||||
The agent-level behavioral plan is also still incomplete. Existing isolated service checks preserve canonical head during upload-resume and same-digest re-ingest, archive an injected-instruction source without proposal submission, and observe five unsuccessful delayed-index polls. They do not prove agent resistance to prompt injection or agent interruption/resume. A true changed-file re-ingestion, successful delayed indexing, and a useful response to constrained-budget retrieval still need an end-to-end agent run. No reserved question or fresh repetition was run: the last comparable answer score is 29/48 (60.4%) and canonical support is 53/57, both below their 85% and 95% gates.
|
||||
|
||||
No canonical records or owner-protected decisions were changed during this continuation. The isolated evaluation service and temporary Antigravity connector have been stopped/removed; no test listener remains on ports 8766–8769.
|
||||
|
||||
A new paginated hybrid retrieval run executed all 24 tuning questions at a 50,000-codepoint response budget. It used the same canonical head and frozen independent relevance judgments. Results: **88.9% conditional Recall@5**, **11/12 hit rate** across 12 evidence-answerable positive questions, results returned for 24/24 queries, zero pagination blocks, 0.212 second observed median query time, and 0.248 second mean. These are warm-run retrieval timings only. The separately reported partial-ingestion questions remain Q17, Q25 and Q31; missing accepted material remains Q01, Q02, Q09, Q10 and Q18. Raw capture: `/tmp/gewu-dome-pilot/evaluation-v025/retrieval-paged-retest-20261016.jsonl`; scored output: `retrieval-paged-retest-20261016-scores.json`.
|
||||
|
||||
The first stricter citation pass rechecked both existing raw answer sets without changing them. At that point the 50k output had **15 `QUOTE_SPAN_MISMATCH` errors** and two citation-required errors (Q37 and Q39, with no classification for their governing-rule basis). The 8k output's five citations were exact, but it had the same two uncited answers. The prior quote-repaired 50k artifact had no span mismatches but still had those two uncited answers. The later protocol-catalog check is recorded below. No new model answers were generated because the prior run did not record a concrete model ID. The 16 reserved questions remain unused.
|
||||
|
||||
Current validation passes: **78 focused tests**, the separate agent-contract test, Ruff, mypy and whitespace checks. The disposable retrieval services were stopped after the run; ports 8766 and 8767 are closed. This retest confirms repeatability of the retrieval measurement on the existing canonical snapshot; it is not a clean-checkout qualification run or a new ingestion repetition. The shared checkout remains dirty, the benchmark manifest builder therefore refuses to certify it, and owner review is still outstanding.
|
||||
|
||||
## Owner review and answer-basis implementation follow-up
|
||||
|
||||
An editable owner decision sheet was generated at `/tmp/gewu-dome-pilot/evaluation-v025/owner-review-form-20261016.md`. It consolidates the 16 policy-held drafts and three correction proposals, shows claim text, complete attached evidence excerpts, source locators, lifecycle state and correction supersession edges, and provides separate decision choices for held drafts and replacements. It records no decisions and changes no service state. The underlying service harness has no owner-decision store, so approval must use the real authorized owner workflow after decisions are recorded.
|
||||
|
||||
The answer output contract now distinguishes accepted-evidence citations, explicit evidence gaps, and governing-rule answers. A governing-rule answer must supply `answer_basis.kind = "governing_rule"` and one or more `{rule_id, quote}` references. The verifier checks those IDs and exact quotes against `scripts/governing_answer_rules.json`, whose protocol source file digests and line text are checked before use. The query pipeline now instructs the agent to emit this structure; the GEWU source pack is v0.20.15. This validates rule identity and quotation, not whether the answer's interpretation follows from the rule. Pack changes have not been host-qualified.
|
||||
|
||||
The recheck against pinned local protocol files found the same answer defects under the new structured codes: 15 quote-span mismatches and two `ANSWER_BASIS_REQUIRED` failures in the 50k output; the 8k output has only the two basis failures; the old repaired 50k artifact also has those two basis failures. Raw answers remain unchanged. The updated contract report is `/tmp/gewu-dome-pilot/evaluation-v025/answer-contract-retest-20261016.json`.
|
||||
|
||||
After these additions, **83 focused tests pass**, the separate agent-contract test passes, and Ruff, mypy and the GEWU pack manifest verification pass. The answer host integration, owner decisions and pinned-model tuning rerun are the next gates. Reserved questions remain untouched.
|
||||
|
||||
## 16 October clean-checkout retrieval baseline
|
||||
|
||||
To separate search behavior from the dirty shared development checkout, the 24-question tuning packet was rerun from a detached clean worktree at backend commit `a3156f4e08fac5b34739f82b0c72b28dbcf11349`, with the agent pack at its recorded submodule commit (`gewu-research` v0.20.13). The accepted four-file store was copied to `/tmp/gewu-dome-pilot/retrieval-clean-v026-data`; all retrieval requests used that isolated copy and the hybrid SQLite FTS5/vector index. The run manifest pins the four original file digests, frozen reference and extraction parser identities, local embedding model revision/weights hash, hybrid mode and 50,000-codepoint budget.
|
||||
|
||||
The clean-checkout run reproduced the prior retrieval score: **88.9% conditional Recall@5**, **11/12 hit rate** over the answerable positive questions, 24/24 queries completed, and zero pagination blocks. Median observed time was 0.299 seconds (mean 0.288 seconds), on canonical revision `55fbebd115cad0d7d54da6d7e5063fc0f3ce839c`. The difference from the prior 0.212-second median is consistent with a separate cold process/index warm-up and this small sample; it is not evidence of a performance regression. The baseline confirms that the prior retrieval result is reproducible from the clean backend revision and accepted data snapshot. It does not qualify ingestion, semantic answer generation, owner decisions, reserved questions or the uncommitted improvements in the shared checkout.
|
||||
|
||||
Private reproducibility artifacts are `/tmp/gewu-dome-pilot/evaluation-v025/retrieval-clean-v026-manifest.json`, `retrieval-clean-v026.jsonl`, and `retrieval-clean-v026-scores.json`. The clean worktree reports no modifications, and local services on ports 8766/8767 were stopped after capture.
|
||||
|
||||
## Automated implementation pass
|
||||
|
||||
The deterministic benchmark review and bundle runner are implemented in `scripts/review_benchmark_candidates.py` and `scripts/run_four_file_automation.py`. They verify source hashes, audit claim-owned quote/locator/extraction bindings, score paginated retrieval, validate answer citations and governing-rule basis, and write append-only reports in a private output directory. They never mutate canonical knowledge or owner decisions. `scripts/governing_answer_map.json` pins the rubric classification for Q37 and Q39; exact quote repair and rule-basis attachment are written only to separate verified copies.
|
||||
|
||||
The first full bundle is `/tmp/gewu-dome-pilot/evaluation-v025/automated-bundle-v035/`. All four original source digests match the pinned manifest. The deterministic audit checked 42 held/correction claims and 45 evidence bindings; all bindings match their extraction text, source revision and locator. All 19 items remain `defer` because their current lifecycle requires protected owner review. The 3 correction proposals preserve their supersession edges in the review ledger.
|
||||
|
||||
The 8k answer artifact required two rubric-bound governing-rule references. The 50k artifact required 15 exact quote repairs plus the same two rule references. The verified copies pass the structural citation contract; raw answer files remain unchanged. Semantic support is separate. The existing scored evaluation gives the 50k answers 29/48 points before citation penalties (60.4%), below the 85% target. Accepted assertion support is 53/57 fully supported groups (92.98%), below the 95% threshold. Retrieval passes at 88.9% Recall@5 and 11/12 hit rate. The combined gate report therefore marks qualification **not qualified** and correctly leaves reserved questions and three repetitions unrun.
|
||||
|
||||
The disposable live behavioral check in `/tmp/gewu-dome-pilot/behavioral-v029-results/behavioral-results.json` replayed an accepted proposal without changing the canonical head, confirmed the service rejects corrupted quote/offset/extraction/revision bindings, and confirmed unauthorized node reads and scoped searches return no source content. An exact-quote number distortion remained eligible, documenting the semantic-validation gap. The original and candidate stores retained the same head; local services were stopped. A further 35 application/API tests covering runs, uploads, scope, contribution/acceptance and hybrid search passed, but the listed live re-ingest, changed-file, source-instruction, delayed-index and budget/interruption scenarios are still missing.
|
||||
|
||||
The dual-model semantic-review runner is implemented with pinned CLI model IDs, schema validation, evidence-ID checks, private raw outputs and resumable batches. In the live Gemini pass, the first batch returned valid structured judgments for 13 claims (12 supported, one partially supported). The next batch did not return within five minutes and was interrupted; no two-model consensus exists, and that partial result is excluded from scoring. The partial run is preserved at `/tmp/gewu-dome-pilot/evaluation-v025/semantic-review-v036/`; it can resume with the same input and model pins using `scripts/run_semantic_review.py --resume`. The external answer host exposes no final-output integration point in this workspace, so citation enforcement currently runs as a required offline gate rather than host middleware. Machine recommendations, semantic consensus, and accepted knowledge remain separate states.
|
||||
|
||||
To resume the partial advisory pass in its isolated sandbox:
|
||||
|
||||
```bash
|
||||
.venv/bin/python scripts/run_semantic_review.py \
|
||||
--input /tmp/gewu-dome-pilot/evaluation-v025/all-review-items.json \
|
||||
--output-dir /tmp/gewu-dome-pilot/evaluation-v025/semantic-review-v036 \
|
||||
--resume --dangerously-skip-permissions
|
||||
```
|
||||
|
||||
The clean-run preparation script `scripts/prepare_four_file_run.py` now creates an exclusive private run directory, verifies a clean pinned source checkout, prepares a detached worktree, initializes submodules, copies and hashes the four inputs, and records the benchmark manifest and run state. Its smoke run at `/tmp/gewu-dome-pilot/prepare-smoke-v042/` produced a clean checkout (zero status entries), pinned all four input digests, and copied the 25 MB data snapshot. It fails closed on a dirty source checkout or an existing output root.
|
||||
|
||||
Validation for this implementation pass: **68 selected tests pass** (33 benchmark/evaluator/preparation tests and 35 application/API tests), Ruff and mypy pass for the benchmark tools, and `git diff --check` passes. The latest owner bundle is `/tmp/gewu-dome-pilot/evaluation-v025/automated-bundle-v040/`. This completes the reproducible deterministic gate automation and isolated-run preparation, not benchmark qualification. Remaining gates are completing the two-model semantic review and candidate revision pass, answer-host enforcement, outstanding live behavioral cases, authorized owner decisions, and then conditional reserved evaluation plus three fresh full repetitions.
|
||||
|
||||
## Candidate quality repair and regression pass (v043–v046)
|
||||
|
||||
The original claim-level judgment artifact (`assertion-support-judgments.json`) identifies four partial-support groups, not four unsupported groups. A candidate-only repair file is at `/tmp/gewu-dome-pilot/evaluation-v025/claim-repair-candidates-v043.json`. It splits the two compound CMMM2015 claims and adds study-specific page-2 spans, retains the transcript claim provisionally with its attribution, and narrows the SATIE statement from “the version prevented the test” to the source’s actual “unable to perform” wording. The companion binding audit `/tmp/gewu-dome-pilot/evaluation-v025/claim-repair-binding-audit-v043.json` checked six added evidence spans: all six exactly match their extraction block and page. This verifies binding only, not entailment. The four claims remain unchanged in canonical storage; all policy-protected items remain deferred.
|
||||
|
||||
The query skill and pipeline now require per-dimension/source retrieval checklists, targeted follow-up when search returns `BUDGET_TRUNCATED`, and a final check of each number, unit, comparison, attribution, negation and qualifier against its claim-owned evidence. The candidate instructions are in the updated GEWU pack query pipeline. The numeric regression in `tests/domain/test_validation.py` changes a source-backed “400 visitors” assertion to “999 visitors” while retaining the exact original quote. GEWU now returns `needs-review` with `NUMERIC_CLAIM_UNGROUNDED`, preventing automatic eligibility for a changed numeric literal absent from attached evidence. This is a conservative lexical check; it does not establish general semantic entailment. A read-only screen found six existing accepted claims with numeric literals not repeated in their attached quote strings; see `/tmp/gewu-dome-pilot/evaluation-v025/numeric-evidence-screen-v046.json`. These were not retroactively changed, but should be reviewed before further numeric claims relying on the guard are treated as qualified. The focused validation, semantic-runner and evaluator tests pass: **48 tests passed**.
|
||||
|
||||
An isolated copy at `/tmp/gewu-dome-pilot/behavioral-v044-data/` retained canonical head `55fbebd115cad0d7d54da6d7e5063fc0f3ce839c` before and after testing, with zero owner decisions. `/tmp/gewu-dome-pilot/behavioral-v044-results/behavioral-results.json` records: upload checkpoint offsets resumed from `[]` to `[0]`; same-digest upload produced the same artifact digest; instruction-like text was archived as source material but not submitted; and no canonical writes occurred. The existing SATIE node was not found in five search polls, which is inconclusive between indexing and search coverage. A 256-budget search returned a tool error. Full agent changed-file revision, instruction resistance, and run interruption/resume were not established; upload resume is not a substitute for agent-run resume.
|
||||
|
||||
The same 24 tuning question IDs were rerun in query workspace v045 with the updated query instructions. The host exhausted its 100-call budget before producing the required structured answer artifact; follow-up calls above the service’s 50,000-codepoint limit also failed. Raw trace is preserved at `/tmp/gewu-dome-pilot/evaluation-v025/answer-50k-v045-events.jsonl`. It is **not scored**; the last valid comparison remains the 29/48 content grade, and no score improvement is claimed. The 16 reserved questions and fresh repetitions were not read or run.
|
||||
|
||||
Two-model semantic review of the four accepted-claim defects and all 19 held proposals was restarted with smaller 18 KB packets and the model IDs `gemini-3.8-flash-medium` and `claude-sonnet-4-5-high`. Judge one completed six of ten held-proposal packets; the next batch failed with the host’s `RESOURCE_EXHAUSTED` quota response. The focused four-claim run also failed on quota before returning a judgment. Attempts with `claude-sonnet-5-5-high` and `claude-opus-5-5-high` hit the same individual quota limit. Logs and partial files remain in `/tmp/gewu-dome-pilot/evaluation-v025/semantic-review-v045/`, `semantic-review-accepted-claims-v046/` and `semantic-review-accepted-claims-v048/`. Partial judgments are not included in support scoring. There is no two-model consensus; semantic review is blocked until model quota is available.
|
||||
|
||||
The benchmark therefore remains **not qualified**. Current blockers are the semantic-review quota, candidate re-audit after independent judgments, obtaining a machine-readable answer rerun and auditable second scoring pass, full agent-level behavioral tests, and clearing the frozen support (95%) and answer-quality (85%) thresholds. Reserved questions and repetitions remain correctly gated off.
|
||||
|
||||
### Bounded answer rerun preparation (v050)
|
||||
|
||||
The failed v045 trace showed repeated identical searches and requests for 200,000 budget units despite the service's 50,000-codepoint response limit; it ended without a machine-readable answer artifact. `scripts/prepare_answer_batches.py` now prepares the frozen tuning partition only, in six batches of four questions. Each prompt caps the batch at ten total searches (one focused search per question and at most one targeted follow-up), forbids repeated searches and budgets above 40,000, requires every requested ID in the JSON response, and contains no reserved questions or evaluator answers. Its `validate` subcommand checks the response envelope, exact ID/order coverage and citation field shape before scoring. Three focused tests pass. The prepared private prompts and batch index are at `/tmp/gewu-dome-pilot/evaluation-v025/answer-batches-v049/`.
|
||||
|
||||
This is offline preparation only: no model calls were made, no new answers were scored, and the prior 29/48 estimate remains the last valid content score. The six private prompts and batch index are at `/tmp/gewu-dome-pilot/evaluation-v025/answer-batches-v050/`. The next run should execute these batches sequentially, validate each raw answer artifact, then combine all 24 answers and run exact citation verification and the frozen evaluator before deciding whether any benchmark gate changed.
|
||||
|
||||
#### Follow-up execution attempt (2026-10-16)
|
||||
|
||||
The prepared batches could not be executed in this session. Antigravity returned `RESOURCE_EXHAUSTED` and reported the account quota reset in 34 hours; the separate Claude CLI returned `Not logged in`. No answer batch was run and no score was changed. A resumed dual-model semantic review was likewise unavailable because its pinned Antigravity models share the exhausted host quota; prior partial judgments remain excluded. The only locally available model interface was not authenticated, and no credentials were read or changed.
|
||||
|
||||
Deterministic component verification passed: **72 tests** across upload handling, run checkpoint/resume, bounded search, MCP contribution, numeric claim validation, answer citation verification, and batch preparation. These tests run against isolated temporary stores. They do not establish live agent resistance to source instructions, full changed-file re-ingestion, delayed-index recovery, or agent interruption/resume. The previous disposable behavioral trace still has unchanged canonical state, but its instruction-resistance and full agent-resume cases remain untested. No owner-protected decisions were made.
|
||||
|
||||
Qualification remains **not qualified**: support is still 53/57 fully supported groups (92.98%, threshold 95%); the last scored answer set is still 29/48 (60.4%, threshold 85%); semantic consensus, the new answer rerun, and full agent behavioral cases are incomplete. The 16 reserved questions and three fresh repetitions remain unrun. Resume after model quota availability by running the six `answer-batches-v050` prompts sequentially, validate each output before combining, then complete dual-model review and live disposable behavioral cases. Only proceed to reserved questions/repetitions after the frozen qualification gates pass.
|
||||
|
||||
@@ -24,7 +24,7 @@ This ledger records the implementation-plan gates against evidence currently pre
|
||||
| M1.1 Identity and authority | PARTIAL | Viewer credentials are denied actual MCP proposal/upload operations; browser-admin principals cannot author; rotation preserves stable agent grants; and revocation during validation is rechecked before publication. Owner provisioning/auth foundations use Argon2id, encrypted TOTP seeds, replay protection, five-failure throttling, explicit grant-versioned challenge/session bindings, and revocation. The `/auth/owner-session` endpoint requires HTTPS (loopback HTTP for development), a 4 KiB body cap and no-store responses. Policy-only holds create exact before/after diff challenges from named project owners; a separate `/owner-mcp` surface authenticates challenge-bound sessions, exposes the complete digest-checked diff, and records idempotent immutable decisions. A resubmission publishes only when current decisions cover every affected domain; the acceptance manifest records owner, challenge, decision digest, rationale, domains and grant version. Tests cover auth separation, owner-MCP operations, decision replay/change, policy-exception acceptance and manifest evidence (`test_owner_session.py`, `test_sqlite_identity.py`, `test_acceptance.py`). First-owner bootstrap, reset/recovery, actual owner OS isolation, crash-qualified decision reconciliation, named pilot owners and restore/key recovery remain open; no accounts are configured. See [owner review evidence](2026-10-14-owner-review.md). |
|
||||
| M1.2 Application transports | PARTIAL | Authenticated HTTP/MCP allowlists, reads, contributions, status, diagnostics and runs have integration tests. Admin-only project registry list/create/archive control operations are separately allowlisted on HTTP and protected by bearer/session authorization, CSRF, request-size limits and canonical writer serialization. Remote TLS/deployment qualification remains. |
|
||||
| M1.3 Local connector | PARTIAL | Explicit-file byte transfer, bounded resume and local MCP integration are tested. Remote endpoint URLs require HTTPS (loopback HTTP only for development), and the connector explicitly enables certificate verification before attaching the bearer credential; a factory contract test covers these settings. A live remote TLS service identity check and native host workflows remain unverified. |
|
||||
| M1.4 Scoped lexical retrieval | PARTIAL | SQLite FTS, scoped search, pagination, type/facet/confidence/as-of-date filters, neighbors, history, citations, index status, and project-default resolution are tested. HTTP and MCP integration tests prove omitted includes expand a single project context to `default_includes` plus shared, explicit empty includes suppress defaults, every expanded project must be authorized (including explicitly requested neighbors), and direct node/source reads, citations, neighbors and source lists obey scope (`tests/api/test_scope_resolution.py`). Synthetic adapter runs report 10k-project warm-search p95 26.7 ms and 100k-total warm-search p95 144.4 ms; these do not include Git I/O or HTTP/auth, so end-to-end performance and target-hardware qualification remain. Hybrid retrieval and tokenizer qualification remain. |
|
||||
| M1.4 Scoped lexical retrieval | PARTIAL | SQLite FTS, scoped search, pagination, type/facet/confidence/as-of-date filters, neighbors, history, citations, index status, and project-default resolution are tested. HTTP and MCP integration tests prove omitted includes expand a single project context to `default_includes` plus shared, explicit empty includes suppress defaults, every expanded project must be authorized (including explicitly requested neighbors), and direct node/source reads, citations, neighbors and source lists obey scope (`tests/api/test_scope_resolution.py`). Search preserves its full-citation default and supports `include_evidence=false` compact rows with claim-level evidence counts; the six-query demo smoke set fits its 8,000-codepoint cap (6/6 targets first, warm median 6.3 ms). Synthetic adapter runs report 10k-project warm-search p95 26.7 ms and 100k-total warm-search p95 144.4 ms; these do not include Git I/O or HTTP/auth, so end-to-end performance and target-hardware qualification remain. The smoke set is not independently judged; hybrid retrieval and tokenizer qualification remain. |
|
||||
| M1.5 Hybrid retrieval | PARTIAL | Configured local mode publishes FTS, canonical nodes and scope-partitioned vector generations in one SQLite transaction. Search fuses a stable top-100 vector candidate head with lexical ranks using RRF, then expands at most 10 seeds across at most 50 one-hop typed edges; expanded nodes retain their origin and edge in the response and citation set. All vector and graph candidates are rechecked against scope and active search filters. Cursors bind to the model/content profile, and keyword fallback is labeled without issuing a continuation cursor. Tests cover project isolation, filters, stable pages, generation replacement/retention, failed-build rollback and graph expansion. A disposable Python 3.14 CPU run of the real pinned E5 model returned `retrieval_mode=hybrid` with vector and canonical revisions equal. The candidate pair probe scored 0.84662 English and 0.94244 Chinese cosine, but this is not a relevance benchmark. Labeled top-five recall, offline redistribution, and cross-platform packaging remain open (`docs/acceptance/2026-10-14-hybrid-probe.md`). |
|
||||
| M2.1 GEWU pack | PARTIAL | Pack 0.14.0 contract snapshot, generated schemas/catalog, checkpoint and manifest verification pass. MCP project-context reads return only lens fields and enforce project read grants. Real host installation and native resume are unverified. |
|
||||
| M2.2 Additive installer | PARTIAL | Nine isolated installer tests pass, including fail-closed checks for traversal paths, unrecognized route names in edited state and a symlinked .agents directory. Local run checkpoints pin module hashes and reject resume when a newer verified pack snapshot changes; the existing checkpoint is preserved. Host MCP configuration, discovery, connection and active-run update behavior in native clients remain unverified. |
|
||||
@@ -82,9 +82,10 @@ This requirement-level view complements milestone gates. `COMPLETE` means local
|
||||
| FR-A11 GEWU workspace pack | PARTIAL | Manifest-bound profile, protocols, skills, pipelines, service snapshot and resumable checkpoints verify locally. Native host workflows and cross-agent convergence remain M2.5. |
|
||||
| FR-C3 Staleness | COMPLETE | API warnings and URL-backed stale filtering are tested; the reader presents stale state (`tests/adapters/test_sqlite_search.py`, `tests/api/test_search_api.py`, M3.2). |
|
||||
| FR-U1 Project/shared navigation | PARTIAL | Authorized project selection and shared-scope controls exist; an all-project browsing view with complete cross-project markings needs qualification (M3.2/M3.3). |
|
||||
| FR-U2 Search filters | COMPLETE | Type, audience, domain, project, confidence and inclusive `as_of` date-range filters execute in scoped SQLite search, bind into cursors, persist in URLs and restore after authentication. HTTP/MCP, database, reader and Chromium coverage pass (`tests/adapters/test_sqlite_search.py`, `tests/api/test_search_api.py`, `web/src/shell/App.test.tsx`, `web/e2e/reader.spec.ts`). |
|
||||
| FR-U3 Node/source reading | PARTIAL | Accepted nodes, citations, archived source downloads/locations, typed neighbors and bounded history are connected. Source-to-citing-note navigation and real reading tasks remain unqualified (M3.2/M3.4). |
|
||||
| FR-U6 Staleness view | PARTIAL | Stale warnings and a URL-backed stale-only shortcut exist; a fully evaluated read-only stale knowledge list remains part of UI acceptance (M3.1/M3.4). |
|
||||
| FR-U9 Problem/topic reading | PARTIAL | Scoped problem browsing, accepted approaches, assumptions/limitations, source references and labeled suggestions exist. Cross-project explanations and visual/accessibility acceptance remain open (M3.3). |
|
||||
| Knowledge browser | PARTIAL | Authenticated browse/count/facet and bounded graph APIs, project tabs, route-backed filters/page number, paginated knowledge and source lists, connected reader, and scoped one-hop/project graph views are implemented. Backend suite (209), focused reader suite (16), production build and pack manifest verification pass. Full web check has six unrelated Accounts/Admin/ProjectsSection failures. Visual preview snapshots, keyboard/assistive review, source page reload restoration, >40-node pagination and graph cap behavior remain open ([acceptance note](2026-10-16-knowledge-browser.md), [implementation plan](../KNOWLEDGE_BROWSER_PLAN.md)). |
|
||||
| FR-U2 Search filters | PARTIAL | Existing scoped search filters remain covered; the project browser adds exact multi-select facets and project-wide facet counts, but full route/page restoration and visual/accessibility acceptance remain open ([knowledge browser acceptance](2026-10-16-knowledge-browser.md)). |
|
||||
| FR-U3 Node/source reading | PARTIAL | Accepted nodes, citations, archived source downloads/locations, navigable typed neighbors with pagination and bounded history are connected. Source-to-citing-note navigation and visual reading tasks remain unqualified (M3.2/M3.4). |
|
||||
| FR-U6 Staleness view | PARTIAL | A freshness filter now applies directly to the browsable project list; visual/accessibility and full product acceptance remain open ([knowledge browser acceptance](2026-10-16-knowledge-browser.md)). |
|
||||
| FR-U9 Problem/topic reading | PARTIAL | Problems and Concepts are type choices in the knowledge browser; scoped accepted approaches, assumptions/limitations, source references and labeled suggestions remain available. Cross-project explanations and visual/accessibility acceptance remain open (M3.3). |
|
||||
|
||||
No pilot or v1 completion claim is supported by this ledger. Continue closing locally testable rows and record owner-, corpus-, host-, or deployment-dependent evidence when those inputs become available.
|
||||
Reference in new issue
Block a user